RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 BCL2P10415 239 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 S100A4P26447 101 aaKnown RBP8.94□□□□□ -0.98
COL5A1-206ENST00000465877 RPL35P42766 123 aaKnown RBP8.94□□□□□ -0.98
COL5A1-206ENST00000465877 MEF2BQ02080 365 aaPredicted RBP8.94□□□□□ -0.98
COL5A1-206ENST00000465877 SLAQ13239 276 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 LINC01559Q495D7 138 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 ALKAL2Q6UX46 152 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 DERL1Q9BUN8 251 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 HHLA3Q9XRX5 114 aa8.94□□□□□ -0.98
COL5A1-206ENST00000465877 Q6ZR54 194 aa8.93□□□□□ -0.98
COL5A1-206ENST00000465877 MLST8Q9BVC4 326 aa8.93□□□□□ -0.98
COL5A1-206ENST00000465877 IL36BQ9NZH7 164 aa8.93□□□□□ -0.98
COL5A1-206ENST00000465877 TMSB15BA0A087X1C1 80 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 PGPEP1LA6NFU8 196 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 ESRGQ1W209 222 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 CENPWQ5EE01 88 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 CFAP126Q5VTH2 177 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 BAGE2Q86Y30 109 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 PCNPQ8WW12 178 aaKnown RBP8.92□□□□□ -0.98
COL5A1-206ENST00000465877 PTH2Q96A98 100 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
COL5A1-206ENST00000465877 MRPS16Q9Y3D3 137 aaKnown RBP8.92□□□□□ -0.98
COL5A1-206ENST00000465877 GRIFINA4D1Z8 144 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 K7EQD1 137 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 RS1O15537 224 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 PDE6DO43924 150 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 GYPEP15421 78 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 PRR27Q6MZM9 219 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
COL5A1-206ENST00000465877 NBDYA0A0U1RRE5 68 aa8.9□□□□□ -0.98
COL5A1-206ENST00000465877 ARMS2P0C7Q2 107 aa8.9□□□□□ -0.98
COL5A1-206ENST00000465877 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
COL5A1-206ENST00000465877 SRIP30626 198 aa8.9□□□□□ -0.98
COL5A1-206ENST00000465877 TAGLN2P37802 199 aaKnown RBP8.9□□□□□ -0.98
COL5A1-206ENST00000465877 RPL19P84098 196 aaKnown RBP8.9□□□□□ -0.98
COL5A1-206ENST00000465877 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.98
COL5A1-206ENST00000465877 VAX2Q9UIW0 290 aa8.9□□□□□ -0.98
COL5A1-206ENST00000465877 DNAH11Q96DT5 4516 aa8.9□□□□□ -0.98
COL5A1-206ENST00000465877 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 A8MWV9 139 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 CXCL1P09341 107 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 BLOC1S1P78537 153 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 PIK3CD-AS1Q5SR53 167 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 SYT8Q8NBV8 401 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 PARLQ9H300 379 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 PHLDA3Q9Y5J5 127 aa8.89□□□□□ -0.99
COL5A1-206ENST00000465877 LOC100131303A0A0U1RQF7 123 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 RTL8CO15255 209 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 CIDEAO60543 219 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 GNG4P50150 75 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 RHOHQ15669 191 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 TTC32Q5I0X7 151 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 NEGR1Q7Z3B1 354 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 Q9H8V8 135 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 SCRT2Q9NQ03 307 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 MED9Q9NWA0 146 aa8.88□□□□□ -0.99
COL5A1-206ENST00000465877 DYNC1H1Q14204 4646 aaKnown RBP8.87□□□□□ -0.99
COL5A1-206ENST00000465877 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 NXPH4O95158 308 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 IGLV2-8P01709 118 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 MGST1P10620 155 aaKnown RBP8.87□□□□□ -0.99
COL5A1-206ENST00000465877 ZFP2Q6ZN57 461 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 ZFP82Q8N141 532 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 LYPD6BQ8NI32 183 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 KRTAP1-5Q9BYS1 174 aa8.87□□□□□ -0.99
COL5A1-206ENST00000465877 M0R381 172 aa8.86□□□□□ -0.99
COL5A1-206ENST00000465877 SOHLH1Q5JUK2 328 aa8.86□□□□□ -0.99
COL5A1-206ENST00000465877 C1orf134Q5TEV5 83 aa8.86□□□□□ -0.99
COL5A1-206ENST00000465877 DMRTA1Q5VZB9 504 aa8.86□□□□□ -0.99
COL5A1-206ENST00000465877 JPT2Q9H910 190 aa8.86□□□□□ -0.99
COL5A1-206ENST00000465877 RHODO00212 210 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 SIVA1O15304 175 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 TOR2AQ5JU69 321 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 FAM74A4Q5TZK3 123 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 UFSP1Q6NVU6 142 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 OR10AG1Q8NH19 301 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 PRADC1Q9BSG0 188 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 SAMD10Q9BYL1 202 aa8.85□□□□□ -0.99
COL5A1-206ENST00000465877 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 PRSS29PA6NIE9 313 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 SNAI2O43623 268 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 C6orf223Q8N319 242 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 SFRP2Q96HF1 295 aa8.84□□□□□ -0.99
COL5A1-206ENST00000465877 A0A087WWL8 130 aa8.83□□□□□ -1
COL5A1-206ENST00000465877 A0A1W2PPQ1 181 aa8.83□□□□□ -1
COL5A1-206ENST00000465877 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
COL5A1-206ENST00000465877 TMEM250H0YL14 139 aa8.83□□□□□ -1
COL5A1-206ENST00000465877 OR5AL1P0C617 328 aa8.83□□□□□ -1
COL5A1-206ENST00000465877 LINC00694P0DN24 101 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms