RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PCNPQ8WW12 178 aaKnown RBP10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 ZNF479Q96JC4 524 aa10.15□□□□□ -0.78
SQSTM1-205ENST00000464493 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 TRGV4A0A0C4DH28 118 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 PGPEP1LA6NFU8 196 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 H3BNG1 76 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 H3BVH4 76 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 SFTA3P0C7M3 94 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 ARMS2P0C7Q2 107 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 SLAQ13239 276 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 FHL2Q14192 279 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 PRO0255Q9UI72 69 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 HHLA3Q9XRX5 114 aa10.14□□□□□ -0.79
SQSTM1-205ENST00000464493 PAX4O43316 350 aa10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 NDUFS6O75380 124 aaKnown RBP10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 RPL19P84098 196 aaKnown RBP10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 PARLQ9H300 379 aa10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
SQSTM1-205ENST00000464493 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 RS1O15537 224 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 CEBPGP53567 150 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 CRYBA4P53673 196 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 PHLDA3Q9Y5J5 127 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 KMT2AQ03164 3969 aa10.12□□□□□ -0.79
SQSTM1-205ENST00000464493 HYDINQ4G0P3 5121 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 RYR2Q92736 4967 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 C19orf71A6NCJ1 209 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 CIDEAO60543 219 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 CXCL1P09341 107 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 RNF212Q495C1 297 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 SCRT2Q9NQ03 307 aa10.11□□□□□ -0.79
SQSTM1-205ENST00000464493 A8MWV9 139 aa10.1□□□□□ -0.79
SQSTM1-205ENST00000464493 SRP19P09132 144 aaKnown RBP10.1□□□□□ -0.79
SQSTM1-205ENST00000464493 MED14OSP0DP75 135 aa10.1□□□□□ -0.79
SQSTM1-205ENST00000464493 A0A096LPF7 62 aa10.09□□□□□ -0.79
SQSTM1-205ENST00000464493 P01737 135 aa10.09□□□□□ -0.79
SQSTM1-205ENST00000464493 CCL18P55774 89 aa10.09□□□□□ -0.79
SQSTM1-205ENST00000464493 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
SQSTM1-205ENST00000464493 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 K7EN84 100 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 M0R381 172 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 RAB14P61106 215 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 PEA15Q15121 130 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 ZFP82Q8N141 532 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 NUDT10Q8NFP7 164 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 NUDT11Q96G61 164 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 SSBP4Q9BWG4 385 aaPredicted RBP10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 ICOSQ9Y6W8 199 aa10.08□□□□□ -0.8
SQSTM1-205ENST00000464493 XKRY2A2RUG3 117 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 ZNF727A8MUV8 499 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 SNAI2O43623 268 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 OR5AL1P0C617 328 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 MRPL23Q16540 153 aaKnown RBP10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 ZFP2Q6ZN57 461 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 SMDT1Q9H4I9 107 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 JPT2Q9H910 190 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 LY96Q9Y6Y9 160 aa10.07□□□□□ -0.8
SQSTM1-205ENST00000464493 C9JQL5 133 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 K7EQD1 137 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 GZMBP10144 247 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 GYPEP15421 78 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 FAM3BP58499 235 aaPredicted RBP10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 SRSF3P84103 164 aaKnown RBP10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 ESRGQ1W209 222 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 SLC25A29Q8N8R3 303 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 OR10AG1Q8NH19 301 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 RNASE7Q9H1E1 156 aaKnown RBP10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 LINC00588Q9Y4M8 146 aa10.06□□□□□ -0.8
SQSTM1-205ENST00000464493 TRBV6-4A0A1B0GX49 114 aa10.05□□□□□ -0.8
SQSTM1-205ENST00000464493 SPANXN1Q5VSR9 72 aa10.05□□□□□ -0.8
SQSTM1-205ENST00000464493 UFSP1Q6NVU6 142 aa10.05□□□□□ -0.8
SQSTM1-205ENST00000464493 MUC21A0A0G2JKD1 596 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 MUC21A0A140T8X8 626 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 RHODO00212 210 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 NXPH4O95158 308 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 IGLC6P0CF74 106 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 SRIP30626 198 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 FAM74A3Q4VXF1 159 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 LINC01551Q86U37 167 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 PRADC1Q9BSG0 188 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
SQSTM1-205ENST00000464493 A0A087WWL8 130 aa10.03□□□□□ -0.8
SQSTM1-205ENST00000464493 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms