RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DAZAP1Q96EP5 407 aaKnown RBP11.97□□□□□ -0.49
VPS52-215ENST00000464425 SPXQ9BT56 116 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 SPINK4O60575 86 aa11.96□□□□□ -0.49
VPS52-215ENST00000464425 LGALS9BQ3B8N2 356 aa11.96□□□□□ -0.49
VPS52-215ENST00000464425 MRPL16Q9NX20 251 aaKnown RBP11.96□□□□□ -0.49
VPS52-215ENST00000464425 M0R036 132 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 CXCL1P09341 107 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 P0DMU3 169 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 FAM231AP0DMU4 169 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 HOXA5P20719 270 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 LINC01551Q86U37 167 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 NAT8Q9UHE5 227 aa11.95□□□□□ -0.5
VPS52-215ENST00000464425 NUDT3O95989 172 aa11.94□□□□□ -0.5
VPS52-215ENST00000464425 SFTA3P0C7M3 94 aa11.94□□□□□ -0.5
VPS52-215ENST00000464425 ASIPP42127 132 aa11.94□□□□□ -0.5
VPS52-215ENST00000464425 C9orf85Q96MD7 179 aa11.94□□□□□ -0.5
VPS52-215ENST00000464425 IL36BQ9NZH7 164 aa11.94□□□□□ -0.5
VPS52-215ENST00000464425 TRAV26-1A0A087WT03 109 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 A0A0J9YY99 117 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 P01737 135 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 IGHV3-53P01767 116 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 RNASE3P12724 160 aaKnown RBP11.93□□□□□ -0.5
VPS52-215ENST00000464425 S100A4P26447 101 aaKnown RBP11.93□□□□□ -0.5
VPS52-215ENST00000464425 RPS20P60866 119 aaKnown RBP11.93□□□□□ -0.5
VPS52-215ENST00000464425 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 C15orf53Q8NAA6 179 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 RASL10AQ92737 203 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 PTH2Q96A98 100 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 MUC4Q99102 2169 aa11.93□□□□□ -0.5
VPS52-215ENST00000464425 M0R2P5 195 aa11.92□□□□□ -0.5
VPS52-215ENST00000464425 TMSB15BA0A087X1C1 80 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 XKRY2A2RUG3 117 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 GRIFINA4D1Z8 144 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 RPL23P62829 140 aaKnown RBP11.91□□□□□ -0.5
VPS52-215ENST00000464425 RPL19P84098 196 aaKnown RBP11.91□□□□□ -0.5
VPS52-215ENST00000464425 OR2D3Q8NGH3 330 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 RNASE7Q9H1E1 156 aaKnown RBP11.91□□□□□ -0.5
VPS52-215ENST00000464425 SCRT2Q9NQ03 307 aa11.91□□□□□ -0.5
VPS52-215ENST00000464425 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
VPS52-215ENST00000464425 PIK3CD-AS1Q5SR53 167 aa11.9□□□□□ -0.5
VPS52-215ENST00000464425 DNAH6Q9C0G6 4158 aa11.89□□□□□ -0.51
VPS52-215ENST00000464425 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
VPS52-215ENST00000464425 ERVFC1-1P60608 527 aa11.89□□□□□ -0.51
VPS52-215ENST00000464425 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
VPS52-215ENST00000464425 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
VPS52-215ENST00000464425 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
VPS52-215ENST00000464425 OSTCQ9NRP0 149 aa11.89□□□□□ -0.51
VPS52-215ENST00000464425 H3BVH4 76 aa11.88□□□□□ -0.51
VPS52-215ENST00000464425 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
VPS52-215ENST00000464425 ZNF876PQ49A33 203 aa11.88□□□□□ -0.51
VPS52-215ENST00000464425 CT83Q5H943 113 aa11.88□□□□□ -0.51
VPS52-215ENST00000464425 SNAI2O43623 268 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
VPS52-215ENST00000464425 PNRC1Q12796 327 aaPredicted RBP11.87□□□□□ -0.51
VPS52-215ENST00000464425 ADIRFQ15847 76 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 RNF212Q495C1 297 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 C15orf54Q8N8G6 183 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 VSIG2Q96IQ7 327 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 PHLDA3Q9Y5J5 127 aa11.87□□□□□ -0.51
VPS52-215ENST00000464425 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 SFRP2Q96HF1 295 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 ZNF479Q96JC4 524 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 SEC11CQ9BY50 192 aa11.86□□□□□ -0.51
VPS52-215ENST00000464425 IGLV2-18A0A075B6J9 118 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 A8MWL6 223 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 F2Z2F3 143 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 M0R2N4 97 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 GZMBP10144 247 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 FHL2Q14192 279 aa11.85□□□□□ -0.51
VPS52-215ENST00000464425 NACAE9PAV3 2078 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 TRGV4A0A0C4DH28 118 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 F8W036 122 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 H3BNG1 76 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 PAX4O43316 350 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 CIDEAO60543 219 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
VPS52-215ENST00000464425 CCL18P55774 89 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 DMRTA1Q5VZB9 504 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 ZFP82Q8N141 532 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 OR10G8Q8NGN5 311 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 HHLA3Q9XRX5 114 aa11.84□□□□□ -0.51
VPS52-215ENST00000464425 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 FAM231BA6NCW3 169 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 NXPH4O95158 308 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 ADCYAP1P18509 176 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 C10orf91Q5T1B1 145 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 WDR73Q6P4I2 378 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 GFRA4Q9GZZ7 299 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms