RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.33
LMO2-204ENST00000464025 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 A8MTW9 85 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 CD5LO43866 347 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 CDKN1BP46527 198 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 FXYD7P58549 80 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 Q6ZSV7 163 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 TMEM158Q8WZ71 300 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 DUX5Q96PT3 197 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 FOXC2Q99958 501 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 SMIM2Q9BVW6 85 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 KIF25-AS1Q9Y6Z4 181 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 APCP25054 2843 aa13.01□□□□□ -0.33
LMO2-204ENST00000464025 ATP5LO75964 103 aa13□□□□□ -0.33
LMO2-204ENST00000464025 SLURP1P55000 103 aa13□□□□□ -0.33
LMO2-204ENST00000464025 C18orf65Q6ZTR6 163 aa13□□□□□ -0.33
LMO2-204ENST00000464025 OR9G4Q8NGQ1 327 aa13□□□□□ -0.33
LMO2-204ENST00000464025 RASL10AQ92737 203 aa13□□□□□ -0.33
LMO2-204ENST00000464025 C9orf85Q96MD7 179 aa13□□□□□ -0.33
LMO2-204ENST00000464025 CENPEQ02224 2701 aa13□□□□□ -0.33
LMO2-204ENST00000464025 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 COX8AP10176 69 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 LINC00315P59091 139 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 SUMO2P61956 95 aaKnown RBP12.99□□□□□ -0.33
LMO2-204ENST00000464025 RPL32P62910 135 aaKnown RBP12.99□□□□□ -0.33
LMO2-204ENST00000464025 AMTNQ6UX39 209 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 C14orf178Q8N769 122 aaPredicted RBP12.99□□□□□ -0.33
LMO2-204ENST00000464025 OR11H1Q8NG94 326 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 ZMAT4Q9H898 229 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
LMO2-204ENST00000464025 DNAJC9-AS1A6NH13 148 aa12.98□□□□□ -0.33
LMO2-204ENST00000464025 IGHV3-16A0A0C4DH30 117 aa12.98□□□□□ -0.33
LMO2-204ENST00000464025 CD7P09564 240 aa12.98□□□□□ -0.33
LMO2-204ENST00000464025 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
LMO2-204ENST00000464025 KRTAP1-1Q07627 177 aa12.98□□□□□ -0.33
LMO2-204ENST00000464025 IGHV1OR15-1A0A075B7D0 117 aa12.97□□□□□ -0.33
LMO2-204ENST00000464025 DEFB136Q30KP8 78 aa12.97□□□□□ -0.33
LMO2-204ENST00000464025 ORMDL2Q53FV1 153 aa12.97□□□□□ -0.33
LMO2-204ENST00000464025 MXRA5Q9NR99 2828 aa12.97□□□□□ -0.33
LMO2-204ENST00000464025 AGRNO00468 2067 aa12.96□□□□□ -0.33
LMO2-204ENST00000464025 TCAPO15273 167 aa12.96□□□□□ -0.33
LMO2-204ENST00000464025 ODF1Q14990 250 aa12.96□□□□□ -0.33
LMO2-204ENST00000464025 SPRY2O43597 315 aa12.95□□□□□ -0.34
LMO2-204ENST00000464025 STPG4Q8N801 248 aa12.95□□□□□ -0.34
LMO2-204ENST00000464025 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
LMO2-204ENST00000464025 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 BATFQ16520 125 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 SYT8Q8NBV8 401 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 KLHL30-AS1Q8NEE0 82 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 DLX4Q92988 240 aaPredicted RBP12.94□□□□□ -0.34
LMO2-204ENST00000464025 C18orf15Q96N68 181 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 DLEU1O43261 78 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 MGPP08493 103 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 HIST2H2BCQ6DN03 193 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 C16orf95Q9H693 158 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 DKK2Q9UBU2 259 aa12.94□□□□□ -0.34
LMO2-204ENST00000464025 ZNF469Q96JG9 3925 aaPredicted RBP12.93□□□□□ -0.34
LMO2-204ENST00000464025 SORL1Q92673 2214 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 TRAV12-2A0A075B6T6 113 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 PRSS1P07477 247 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 FGF6P10767 208 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 FHL3Q13643 280 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 Q8N1Y9 231 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 TOMM6Q96B49 74 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
LMO2-204ENST00000464025 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
LMO2-204ENST00000464025 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 H3BMM0 161 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 NUDT3O95989 172 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 G0S2P27469 103 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 HINT1P49773 126 aaPredicted RBP12.92□□□□□ -0.34
LMO2-204ENST00000464025 DEFB131AP59861 70 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 SCGB2A2Q13296 93 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 BOD1L2Q8IYS8 172 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 TMEM61Q8N0U2 210 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 CLUHP3Q96NS8 147 aa12.92□□□□□ -0.34
LMO2-204ENST00000464025 KMT2BQ9UMN6 2715 aaPredicted RBP12.91□□□□□ -0.34
LMO2-204ENST00000464025 TRAV12-1A0A0B4J245 112 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 SIVA1O15304 175 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 RNASE1P07998 156 aaKnown RBP12.91□□□□□ -0.34
LMO2-204ENST00000464025 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
LMO2-204ENST00000464025 MDFICQ9P1T7 246 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 HHLA3Q9XRX5 114 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 NBPF19A0A087WUL8 3843 aa12.91□□□□□ -0.34
LMO2-204ENST00000464025 POLR2KP53803 58 aaKnown RBP12.9□□□□□ -0.34
LMO2-204ENST00000464025 KHDC1LQ5JSQ8 128 aa12.9□□□□□ -0.34
LMO2-204ENST00000464025 DYNLRB2Q8TF09 96 aa12.9□□□□□ -0.34
LMO2-204ENST00000464025 TMEM160Q9NX00 188 aa12.9□□□□□ -0.34
LMO2-204ENST00000464025 ZNF256Q9Y2P7 627 aaPredicted RBP12.9□□□□□ -0.34
LMO2-204ENST00000464025 A0A087WX48 190 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms