RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 FAM162BQ5T6X4 162 aa16.48■□□□□ 0.23
SMKR1-201ENST00000462322 CFAP126Q5VTH2 177 aa16.48■□□□□ 0.23
SMKR1-201ENST00000462322 PTH2Q96A98 100 aa16.48■□□□□ 0.23
SMKR1-201ENST00000462322 hCG_2014768A0A024R1R8 64 aa16.47■□□□□ 0.23
SMKR1-201ENST00000462322 M0R036 132 aa16.47■□□□□ 0.23
SMKR1-201ENST00000462322 NXPH4O95158 308 aa16.47■□□□□ 0.23
SMKR1-201ENST00000462322 GATA1P15976 413 aaPredicted RBP16.47■□□□□ 0.23
SMKR1-201ENST00000462322 RAB5CP51148 216 aa16.47■□□□□ 0.23
SMKR1-201ENST00000462322 KRTAP1-5Q9BYS1 174 aa16.47■□□□□ 0.23
SMKR1-201ENST00000462322 SCO2A0A1W2PP80 73 aa16.46■□□□□ 0.23
SMKR1-201ENST00000462322 A0A1W2PPQ1 181 aa16.46■□□□□ 0.23
SMKR1-201ENST00000462322 SIVA1O15304 175 aa16.46■□□□□ 0.23
SMKR1-201ENST00000462322 S100A9P06702 114 aaKnown RBP16.46■□□□□ 0.23
SMKR1-201ENST00000462322 AKAP14Q86UN6 197 aa16.46■□□□□ 0.23
SMKR1-201ENST00000462322 TXNDC17Q9BRA2 123 aa16.46■□□□□ 0.23
SMKR1-201ENST00000462322 IGHV3-73A0A0B4J1V6 119 aa16.45■□□□□ 0.22
SMKR1-201ENST00000462322 KRBOX1C9JBD0 128 aa16.45■□□□□ 0.22
SMKR1-201ENST00000462322 CIDEAO60543 219 aa16.45■□□□□ 0.22
SMKR1-201ENST00000462322 ZNF674Q2M3X9 581 aa16.45■□□□□ 0.22
SMKR1-201ENST00000462322 LOC100131303A0A0U1RQF7 123 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 CCL20P78556 96 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 SLC51BQ86UW2 128 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 NHLRC2Q8NBF2 726 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 IL36BQ9NZH7 164 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 GNG13Q9P2W3 67 aa16.44■□□□□ 0.22
SMKR1-201ENST00000462322 TRAV1-1A0A0B4J248 108 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 GRIFINA4D1Z8 144 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 TEX46H3BTG2 121 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 H3BVH4 76 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 SULT1A2P50226 295 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 SLC25A29Q8N8R3 303 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 MANBALQ9NQG1 85 aa16.43■□□□□ 0.22
SMKR1-201ENST00000462322 TNP2Q05952 138 aa16.42■□□□□ 0.22
SMKR1-201ENST00000462322 TMSB15BA0A087X1C1 80 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 ARMS2P0C7Q2 107 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 LINC01559Q495D7 138 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 PIK3CD-AS1Q5SR53 167 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 DNLZQ5SXM8 178 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 SH2D6Q7Z4S9 175 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 BAGE2Q86Y30 109 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 PRADC1Q9BSG0 188 aa16.41■□□□□ 0.22
SMKR1-201ENST00000462322 TRBV6-4A0A1B0GX49 114 aa16.4■□□□□ 0.22
SMKR1-201ENST00000462322 A8MWV9 139 aa16.4■□□□□ 0.22
SMKR1-201ENST00000462322 RHOHQ15669 191 aa16.4■□□□□ 0.22
SMKR1-201ENST00000462322 PKD1P98161 4303 aa16.4■□□□□ 0.22
SMKR1-201ENST00000462322 SYT8Q8NBV8 401 aa16.39■□□□□ 0.21
SMKR1-201ENST00000462322 PARLQ9H300 379 aa16.39■□□□□ 0.21
SMKR1-201ENST00000462322 MGST1P10620 155 aaKnown RBP16.38■□□□□ 0.21
SMKR1-201ENST00000462322 DMRTA1Q5VZB9 504 aa16.38■□□□□ 0.21
SMKR1-201ENST00000462322 PKHD1P08F94 4074 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 BTF3P20290 206 aaKnown RBP16.37■□□□□ 0.21
SMKR1-201ENST00000462322 RPL35P42766 123 aaKnown RBP16.37■□□□□ 0.21
SMKR1-201ENST00000462322 ZFP2Q6ZN57 461 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 ZNF575Q86XF7 245 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 C9orf62Q8N4C0 152 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 MLST8Q9BVC4 326 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 JPT2Q9H910 190 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 PHLDA3Q9Y5J5 127 aa16.37■□□□□ 0.21
SMKR1-201ENST00000462322 WFDC10BQ8IUB3 73 aa16.36■□□□□ 0.21
SMKR1-201ENST00000462322 LY96Q9Y6Y9 160 aa16.36■□□□□ 0.21
SMKR1-201ENST00000462322 LINC00315P59091 139 aa16.35■□□□□ 0.21
SMKR1-201ENST00000462322 C11orf52Q96A22 123 aa16.35■□□□□ 0.21
SMKR1-201ENST00000462322 SCRT2Q9NQ03 307 aa16.35■□□□□ 0.21
SMKR1-201ENST00000462322 TRAV9-2A0A087WT02 112 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 M0R381 172 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 IFNA1P01562 189 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 TIRAPP58753 221 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 PRR27Q6MZM9 219 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 Q6ZSN1 163 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 DERL1Q9BUN8 251 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 SAMD10Q9BYL1 202 aa16.34■□□□□ 0.21
SMKR1-201ENST00000462322 RPL19P84098 196 aaKnown RBP16.33■□□□□ 0.2
SMKR1-201ENST00000462322 RHODO00212 210 aa16.32■□□□□ 0.2
SMKR1-201ENST00000462322 EVI2AP22794 236 aa16.32■□□□□ 0.2
SMKR1-201ENST00000462322 MEF2BQ02080 365 aaPredicted RBP16.32■□□□□ 0.2
SMKR1-201ENST00000462322 UFSP1Q6NVU6 142 aa16.32■□□□□ 0.2
SMKR1-201ENST00000462322 ZFP82Q8N141 532 aa16.32■□□□□ 0.2
SMKR1-201ENST00000462322 DNAH11Q96DT5 4516 aa16.31■□□□□ 0.2
SMKR1-201ENST00000462322 FAM74A4Q5TZK3 123 aa16.31■□□□□ 0.2
SMKR1-201ENST00000462322 KIAA1109Q2LD37 5005 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 PDE6DO43924 150 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 DNAH10OSP0CZ25 163 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 BCL2P10415 239 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 CENPWQ5EE01 88 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 ATP6V0E2Q8NHE4 81 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 SFRP2Q96HF1 295 aa16.3■□□□□ 0.2
SMKR1-201ENST00000462322 A0A087WWL8 130 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 GAGE12JA6NER3 117 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 CXCL1P09341 107 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 MED14OSP0DP75 135 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 GAGE1Q13065 139 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 GAGE4Q13068 117 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 GAGE5Q13069 117 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 GAGE13Q4V321 117 aa16.29■□□□□ 0.2
SMKR1-201ENST00000462322 DYNC1H1Q14204 4646 aaKnown RBP16.29■□□□□ 0.2
SMKR1-201ENST00000462322 TRAV8-6A0A0B4J262 113 aa16.28■□□□□ 0.2
SMKR1-201ENST00000462322 K7EP13 123 aa16.28■□□□□ 0.2
SMKR1-201ENST00000462322 OR10J3Q5JRS4 329 aa16.28■□□□□ 0.2
SMKR1-201ENST00000462322 C14orf178Q8N769 122 aaPredicted RBP16.28■□□□□ 0.2
SMKR1-201ENST00000462322 GTSF1LQ9H1H1 148 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms