RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 DPH3P1Q9H4G8 78 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 PHLDA3Q9Y5J5 127 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 ABCA2Q9BZC7 2435 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 COL12A1Q99715 3063 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 TRBV7-1A0A0A6YYK4 115 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 LINC01549A6NIU2 74 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 RNASE4P34096 147 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 UBE2E1P51965 193 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 SCGB2A2Q13296 93 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 KLK9Q2XQG4 91 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 MRPL16Q9NX20 251 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 KLK9Q9UKQ9 250 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 K7ENP7 123 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 CRYGDP07320 174 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 C5orf56Q8N8D9 126 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 NCOR2Q9Y618 2525 aa8.87□□□□□ -0.99
PDZRN3-203ENST00000462146 SCGB1D4Q6XE38 83 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 C9orf139Q6ZV77 190 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 SPOCK3Q9BQ16 436 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 TSHBP01222 138 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 COX6B1P14854 86 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 ASIPP42127 132 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 JPT2Q9H910 190 aa8.86□□□□□ -0.99
PDZRN3-203ENST00000462146 LINC01619G3V211 115 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 RNASE3P12724 160 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 ARL3P36405 182 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 WFDC12Q8WWY7 111 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 IGF2RP11717 2491 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 TRAV21A0A0B4J279 112 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 C11orf86A6NJI1 115 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 J3QR89 54 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 NDUFS8O00217 210 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 APOMO95445 188 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 TSPAN13O95857 204 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 PTH2Q96A98 100 aa8.85□□□□□ -0.99
PDZRN3-203ENST00000462146 LOC107984156A0A0G2JMH3 177 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 SOCS3O14543 225 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 CIDEAO60543 219 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 PSMB2P49721 201 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 RPL11P62913 178 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 NFE4Q86UQ8 179 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 ARL17AQ8IVW1 177 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 SPTAN1Q13813 2472 aaKnown RBP8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 TRAV41A0A0B4J266 112 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 SRD5A1P18405 259 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 EDN2P20800 178 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 SRSF9Q13242 221 aaKnown RBP eCLIP8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 CFAP126Q5VTH2 177 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 Q6ZS46 218 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 OR10J6PQ8NGY7 276 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 NPFFO15130 113 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 TGFAP01135 160 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 FHL3Q13643 280 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 ZNF418Q8TF45 676 aaPredicted RBP8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 TP53TG1Q9Y2A0 90 aa8.84□□□□□ -0.99
PDZRN3-203ENST00000462146 SCGB1A1P11684 91 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 UBE2D1P51668 147 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 BPESC1Q9GZL8 116 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 FOXI1Q12951 378 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 LENEPQ9Y5L5 61 aa8.83□□□□□ -1
PDZRN3-203ENST00000462146 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 SYT8Q8NBV8 401 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 UBTD1Q9HAC8 227 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 A0A087WWL8 130 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 CD7P09564 240 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 LINC00315P59091 139 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 C19orf54Q5BKX5 351 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 DLX4Q92988 240 aaPredicted RBP8.82□□□□□ -1
PDZRN3-203ENST00000462146 ATP6V0BQ99437 205 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 C1QTNF4Q9BXJ3 329 aa8.82□□□□□ -1
PDZRN3-203ENST00000462146 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 LMO4P61968 165 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 FAM19A4Q96LR4 140 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 CDIP1Q9H305 208 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 KIF25-AS1Q9Y6Z4 181 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 A0A0J9YY99 117 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 OVOL1O14753 267 aa8.81□□□□□ -1
PDZRN3-203ENST00000462146 SUMO4Q6EEV6 95 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
PDZRN3-203ENST00000462146 CHD8Q9HCK8 2581 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 IGIPA6NJ69 53 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 TCL1BO95988 128 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 UBE2D3P61077 147 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 UBE2D2P62837 147 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 LY6EQ16553 131 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 NDUFA11Q86Y39 141 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 ZNRF2Q8NHG8 242 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 MOB4Q9Y3A3 225 aa8.8□□□□□ -1
PDZRN3-203ENST00000462146 TMEM238LA0A1B0GVL6 79 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 A6NJY4 79 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 FAM223BA6NKX1 122 aa8.79□□□□□ -1
PDZRN3-203ENST00000462146 UCNP55089 124 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms