RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 MANBALQ9NQG1 85 aa11.08□□□□□ -0.64
COL7A1-203ENST00000459756 TRAV1-1A0A0B4J248 108 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 SCO2A0A1W2PP80 73 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 SIVA1O15304 175 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 NXPH4O95158 308 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 IFNA1P01562 189 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 GYPEP15421 78 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 BLOC1S1P78537 153 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 LYPD5Q6UWN5 251 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 PTH2Q96A98 100 aa11.07□□□□□ -0.64
COL7A1-203ENST00000459756 CIDEAO60543 219 aa11.06□□□□□ -0.64
COL7A1-203ENST00000459756 TNP2Q05952 138 aa11.06□□□□□ -0.64
COL7A1-203ENST00000459756 FMC1Q96HJ9 113 aa11.06□□□□□ -0.64
COL7A1-203ENST00000459756 TXNDC17Q9BRA2 123 aa11.06□□□□□ -0.64
COL7A1-203ENST00000459756 ZFP30Q9Y2G7 519 aa11.06□□□□□ -0.64
COL7A1-203ENST00000459756 RNASE3P12724 160 aaKnown RBP11.05□□□□□ -0.64
COL7A1-203ENST00000459756 GATA1P15976 413 aaPredicted RBP11.05□□□□□ -0.64
COL7A1-203ENST00000459756 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
COL7A1-203ENST00000459756 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
COL7A1-203ENST00000459756 IGKV3D-20A0A0C4DH25 116 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 TRBV6-1A0A0K0K1D8 114 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 RS1O15537 224 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 CFAP126Q5VTH2 177 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 HERC2O95714 4834 aa11.04□□□□□ -0.64
COL7A1-203ENST00000459756 DNAH11Q96DT5 4516 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 MED14OSP0DP75 135 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 BCL2P10415 239 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 S100A4P26447 101 aaKnown RBP11.03□□□□□ -0.64
COL7A1-203ENST00000459756 ASIPP42127 132 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 ZNF506Q5JVG8 444 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 TEX261Q6UWH6 196 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 NHLRC2Q8NBF2 726 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
COL7A1-203ENST00000459756 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
COL7A1-203ENST00000459756 PGPEP1LA6NFU8 196 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 B4DEV8 164 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 LTAP01374 205 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 CRIP1P50238 77 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 MEF2BQ02080 365 aaPredicted RBP11.02□□□□□ -0.65
COL7A1-203ENST00000459756 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
COL7A1-203ENST00000459756 LOC100131303A0A0U1RQF7 123 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 TRBV6-4A0A1B0GX49 114 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 SH2D1AO60880 128 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 S100A9P06702 114 aaKnown RBP11.01□□□□□ -0.65
COL7A1-203ENST00000459756 SLC25A29Q8N8R3 303 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 PRADC1Q9BSG0 188 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 IL36BQ9NZH7 164 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
COL7A1-203ENST00000459756 TRAV9-2A0A087WT02 112 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 A8MWV9 139 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 K7EP13 123 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 TIRAPP58753 221 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 LINC00315P59091 139 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 RHOHQ15669 191 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 ZNF674Q2M3X9 581 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 DNLZQ5SXM8 178 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 DERL1Q9BUN8 251 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 MED9Q9NWA0 146 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 LY96Q9Y6Y9 160 aa11□□□□□ -0.65
COL7A1-203ENST00000459756 M0R036 132 aa10.99□□□□□ -0.65
COL7A1-203ENST00000459756 MGST1P10620 155 aaKnown RBP10.99□□□□□ -0.65
COL7A1-203ENST00000459756 TOR2AQ5JU69 321 aa10.99□□□□□ -0.65
COL7A1-203ENST00000459756 ZFP2Q6ZN57 461 aa10.99□□□□□ -0.65
COL7A1-203ENST00000459756 ZNF575Q86XF7 245 aa10.99□□□□□ -0.65
COL7A1-203ENST00000459756 IGHV3-73A0A0B4J1V6 119 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 RBFOX3A6NFN3 312 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 H3BVH4 76 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 PDE6DO43924 150 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 RPL35P42766 123 aaKnown RBP10.98□□□□□ -0.65
COL7A1-203ENST00000459756 CEBPGP53567 150 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 WFDC10BQ8IUB3 73 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 C11orf52Q96A22 123 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 EIF5A2Q9GZV4 153 aaKnown RBP10.98□□□□□ -0.65
COL7A1-203ENST00000459756 PARLQ9H300 379 aa10.98□□□□□ -0.65
COL7A1-203ENST00000459756 DNAH10OSP0CZ25 163 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 EVI2AP22794 236 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 TAGLN2P37802 199 aaKnown RBP10.97□□□□□ -0.65
COL7A1-203ENST00000459756 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 PRR27Q6MZM9 219 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 BAGE2Q86Y30 109 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 SYT8Q8NBV8 401 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 LYPD6BQ8NI32 183 aa10.97□□□□□ -0.65
COL7A1-203ENST00000459756 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
COL7A1-203ENST00000459756 C16orf90A8MZG2 172 aa10.96□□□□□ -0.65
COL7A1-203ENST00000459756 ARMS2P0C7Q2 107 aa10.96□□□□□ -0.65
COL7A1-203ENST00000459756 CENPWQ5EE01 88 aa10.96□□□□□ -0.65
COL7A1-203ENST00000459756 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
COL7A1-203ENST00000459756 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
COL7A1-203ENST00000459756 GRIFINA4D1Z8 144 aa10.95□□□□□ -0.66
COL7A1-203ENST00000459756 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
COL7A1-203ENST00000459756 SCRT2Q9NQ03 307 aa10.95□□□□□ -0.66
COL7A1-203ENST00000459756 PHLDA3Q9Y5J5 127 aa10.95□□□□□ -0.66
COL7A1-203ENST00000459756 TMSB15BA0A087X1C1 80 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 TRAV8-6A0A0B4J262 113 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 RHODO00212 210 aa10.94□□□□□ -0.66
COL7A1-203ENST00000459756 GNG4P50150 75 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms