RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SLC25A29Q8N8R3 303 aa10.41□□□□□ -0.74
PTPRE-204ENST00000455661 IGLV4-69A0A075B6H9 119 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 ARL3P36405 182 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 LINC01560Q8TB33 94 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 U3KQE9 123 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 LINC01548A6NM66 108 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 LY6HO94772 140 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 TGFAP01135 160 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 IGF1P05019 195 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 TMEM141Q96I45 108 aa10.4□□□□□ -0.74
PTPRE-204ENST00000455661 OVOL1O14753 267 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 EMP1P54849 157 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 ZFAND2AQ8N6M9 145 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 ARHGAP32A7KAX9 2087 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 PCNX1Q96RV3 2341 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 SLC25A20O43772 301 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 GPHB5Q86YW7 130 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 ITLN2Q8WWU7 325 aaPredicted RBP10.39□□□□□ -0.75
PTPRE-204ENST00000455661 KIR2DL4Q99706 377 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 CEP250Q9BV73 2442 aa10.39□□□□□ -0.75
PTPRE-204ENST00000455661 IGIPA6NJ69 53 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
PTPRE-204ENST00000455661 GAGE5Q13069 117 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 GAGE6Q13070 117 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 Q6ZS46 218 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 M0QXV9 152 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 TSHBP01222 138 aa10.38□□□□□ -0.75
PTPRE-204ENST00000455661 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
PTPRE-204ENST00000455661 G3V318 75 aa10.37□□□□□ -0.75
PTPRE-204ENST00000455661 RNASE4P34096 147 aaKnown RBP10.37□□□□□ -0.75
PTPRE-204ENST00000455661 C9JAW5 83 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 VCYO14598 125 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 J3QQQ9 107 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 GNRH2O43555 120 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 POM121L12Q8N7R1 296 aa10.36□□□□□ -0.75
PTPRE-204ENST00000455661 POLEQ07864 2286 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 IGHV4OR15-8A0A075B7B6 117 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 A0A087WW49 117 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 SNCGO76070 127 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 TSPEAR-AS2P59090 65 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 Q8NA96 180 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 RAX2Q96IS3 184 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 GATA3P23771 443 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 CITED1Q99966 193 aa10.35□□□□□ -0.75
PTPRE-204ENST00000455661 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
PTPRE-204ENST00000455661 GAGE2BQ13066 116 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 A4D1N5 150 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 SRD5A1P18405 259 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
PTPRE-204ENST00000455661 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
PTPRE-204ENST00000455661 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
PTPRE-204ENST00000455661 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 A0A0B4J2C4 111 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 FAM90A27PA6NNH2 459 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 F5H697 171 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 RHODO00212 210 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 P0DMU3 169 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 FAM231AP0DMU4 169 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 FAM231CP0DMU5 169 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 ATXN8Q156A1 80 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
PTPRE-204ENST00000455661 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
PTPRE-204ENST00000455661 ADGRG4Q8IZF6 3080 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 LEPROTO15243 131 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 NXPH4O95158 308 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 DEFB104AQ8WTQ1 72 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
PTPRE-204ENST00000455661 AMELXQ99217 191 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 CNOT1A5YKK6 2376 aaKnown RBP10.32□□□□□ -0.76
PTPRE-204ENST00000455661 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
PTPRE-204ENST00000455661 H7C2G1 150 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 LINC00315P59091 139 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 Q1RN00 199 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 FAM19A4Q96LR4 140 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 SIRPDQ9H106 197 aa10.32□□□□□ -0.76
PTPRE-204ENST00000455661 TACC2O95359 2948 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 TRAV2A0A0B4J234 112 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 TRBV7-9A0A0J9YWB2 115 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 SDHAF1A6NFY7 115 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 FAM223BA6NKX1 122 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 B5MCH6 92 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
PTPRE-204ENST00000455661 UBE2E1P51965 193 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 CRIP2P52943 208 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-204ENST00000455661 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
PTPRE-204ENST00000455661 PRR30Q53SZ7 412 aaPredicted RBP10.31□□□□□ -0.76
PTPRE-204ENST00000455661 TTC32Q5I0X7 151 aa10.31□□□□□ -0.76
PTPRE-204ENST00000455661 APRG1Q8IVJ8 170 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms