RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NFE4Q86UQ8 179 aa7.29□□□□□ -1.24
DDX39A-203ENST00000454233 FAT2Q9NYQ8 4349 aa7.29□□□□□ -1.24
DDX39A-203ENST00000454233 IGHV3-73A0A0B4J1V6 119 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 IGKV3D-20A0A0C4DH25 116 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 EREGO14944 169 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 BCL2L11O43521 198 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 MGST1P10620 155 aaKnown RBP7.28□□□□□ -1.24
DDX39A-203ENST00000454233 AKR1C3P42330 323 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 TIRAPP58753 221 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 LGALSLQ3ZCW2 172 aaPredicted RBP7.28□□□□□ -1.24
DDX39A-203ENST00000454233 PIK3CD-AS1Q5SR53 167 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 FAM162BQ5T6X4 162 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 DPPA3Q6W0C5 159 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 WFDC10BQ8IUB3 73 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 SLC25A29Q8N8R3 303 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 OR11H4Q8NGC9 324 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 FAM213BQ8TBF2 198 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 SFT2D1Q8WV19 159 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 BOLA1Q9Y3E2 137 aa7.28□□□□□ -1.24
DDX39A-203ENST00000454233 TRBV6-1A0A0K0K1D8 114 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 A8MWV9 139 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 M0R036 132 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 PAGE4O60829 102 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 SH2D1AO60880 128 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 PFDN1O60925 122 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 COX8CQ7Z4L0 72 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 C10orf126Q8N4M7 172 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 SYT8Q8NBV8 401 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 MBD3L1Q8WWY6 194 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 ZC2HC1AQ96GY0 325 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 IL36BQ9NZH7 164 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 MSRB1Q9NZV6 116 aa7.27□□□□□ -1.25
DDX39A-203ENST00000454233 HERC2O95714 4834 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 A0A1B0GV50 99 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 H3BVH4 76 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 S100A9P06702 114 aaKnown RBP7.26□□□□□ -1.25
DDX39A-203ENST00000454233 CRYGDP07320 174 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 ERVFC1-1P60608 527 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 ZFP2Q6ZN57 461 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
DDX39A-203ENST00000454233 PARLQ9H300 379 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 TNFRSF18Q9Y5U5 241 aa7.26□□□□□ -1.25
DDX39A-203ENST00000454233 IGHV3-38A0A0C4DH36 116 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 GRIFINA4D1Z8 144 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 KRBOX1C9JBD0 128 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 CDK2AP2O75956 126 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 LTAP01374 205 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 H2AFB1P0C5Y9 115 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 ARMS2P0C7Q2 107 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 TPT1P13693 172 aaKnown RBP7.25□□□□□ -1.25
DDX39A-203ENST00000454233 CRIP1P50238 77 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 ZNF674Q2M3X9 581 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 OR10J3Q5JRS4 329 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 DNLZQ5SXM8 178 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 TMUB2Q71RG4 321 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 ATP6V0E2Q8NHE4 81 aa7.25□□□□□ -1.25
DDX39A-203ENST00000454233 TMSB15BA0A087X1C1 80 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 RHODO00212 210 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 KRTAP10-2P60368 255 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 LINC01559Q495D7 138 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 LELP1Q5T871 98 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 GTSF1LQ9H1H1 148 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 PHLDA3Q9Y5J5 127 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 PKD1P98161 4303 aa7.24□□□□□ -1.25
DDX39A-203ENST00000454233 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 SCO2A0A1W2PP80 73 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 GAGE12JA6NER3 117 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 GAGE1Q13065 139 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 GAGE4Q13068 117 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 GAGE5Q13069 117 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 GAGE13Q4V321 117 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 LINC01556Q5JQF7 62 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 DMRTA1Q5VZB9 504 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 EIF5AL1Q6IS14 154 aaKnown RBP7.23□□□□□ -1.25
DDX39A-203ENST00000454233 KRTAP17-1Q9BYP8 105 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 JPT2Q9H910 190 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
DDX39A-203ENST00000454233 TEX46H3BTG2 121 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 M0R381 172 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 RAB5CP51148 216 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 FAM74A4Q5TZK3 123 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 Q6ZSN1 163 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 BAGE2Q86Y30 109 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 ZFP82Q8N141 532 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 SAMD10Q9BYL1 202 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 MANBALQ9NQG1 85 aa7.22□□□□□ -1.25
DDX39A-203ENST00000454233 A0A087WTM6 91 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 PSCAO43653 123 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 IGHV3-30P01768 117 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 IGHV3-33P01772 117 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 IGHV3-30-3P0DP02 117 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 IGHV3-30-5P0DP03 117 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 UFSP1Q6NVU6 142 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
DDX39A-203ENST00000454233 C14orf178Q8N769 122 aaPredicted RBP7.21□□□□□ -1.26
DDX39A-203ENST00000454233 SFRP2Q96HF1 295 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms