RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 LINC00477Q96M19 166 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 GPR82Q96P67 336 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 PRADC1Q9BSG0 188 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 C20orf85Q9H1P6 137 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 ANXA10Q9UJ72 324 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 FLVCR2Q9UPI3 526 aa2.82□□□□□ -1.96
SBDSP1-204ENST00000453858 A0A087WX48 190 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 GNGT2O14610 69 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 MRPS12O15235 138 aaKnown RBP2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 RNASE4P34096 147 aaKnown RBP2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 FLOT2Q14254 428 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 Q1RN00 199 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 KRTAP13-2Q52LG2 175 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 IDNKQ5T6J7 187 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 PRR9Q5T870 116 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 LINC01561Q8N1V8 128 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 OR10R2Q8NGX6 335 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 TYMSOSQ8TAI1 123 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 NAA50Q9GZZ1 169 aaKnown RBP2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
SBDSP1-204ENST00000453858 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 RAB19A4D1S5 217 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 PGPA6NDG6 321 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 ANKRD65E5RJM6 399 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 IGKV1-5P01602 117 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 CRISP2P16562 243 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 HLA-DMAP28067 261 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 TALDO1P37837 337 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 ARPC4P59998 168 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 SELENOHQ8IZQ5 122 aaKnown RBP2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 SLC7A5P1Q8MH63 180 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 ZFAND2AQ8N6M9 145 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 C15orf56Q8N910 161 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 CANT1Q8WVQ1 401 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 GABARAPL3Q9BY60 117 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 C8orf4Q9NR00 106 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 CBY1Q9Y3M2 126 aa2.8□□□□□ -1.96
SBDSP1-204ENST00000453858 ATP5LO75964 103 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 NMBP08949 121 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 INPP1P49441 399 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 PCOTHQ58A44 107 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 CFAP126Q5VTH2 177 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 PHF5AQ7RTV0 110 aaKnown RBP2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 CROCCP2Q86T23 111 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 LGI3Q8N145 548 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 TSKUQ8WUA8 353 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 FAM3DQ96BQ1 224 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 CCDC124Q96CT7 223 aaKnown RBP2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 CIB1Q99828 191 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 TMBIM4Q9HC24 238 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 FGFR1OP2Q9NVK5 253 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 RAB22AQ9UL26 194 aa2.79□□□□□ -1.96
SBDSP1-204ENST00000453858 ZFP92A6NM28 416 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 M0R2P5 195 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 ERCC8Q13216 396 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 MPV17L2Q567V2 206 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 GPR107Q5VW38 600 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 LINC00304Q8N9R0 145 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 TRGV9Q99603 122 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 SLC50A1Q9BRV3 221 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 MAP1LC3CQ9BXW4 147 aa2.78□□□□□ -1.96
SBDSP1-204ENST00000453858 TRBV7-9A0A0J9YWB2 115 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 CRYM-AS1A6NIL9 109 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 H3BRN7 92 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 CRPP02741 224 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 RPL7P18124 248 aaKnown RBP2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 PMCHP20382 165 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 FXYD4P59646 89 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 RPS25P62851 125 aaKnown RBP2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 RAB31Q13636 194 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 CDNFQ49AH0 187 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 MGLLQ99685 303 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 ATP5SQ99766 215 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 ZNF2Q9BSG1 426 aaPredicted RBP2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 SHANK2-AS3Q9BTD1 123 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 AGPAT4-IT1Q9H0P7 198 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 DHRS4-AS1Q9P1J3 65 aa2.77□□□□□ -1.97
SBDSP1-204ENST00000453858 IGHV3-73A0A0B4J1V6 119 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 H3BMQ9 156 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 SLC17A3O00476 420 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 EIF3GO75821 320 aaKnown RBP eCLIP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 CFDP00746 253 aaPredicted RBP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 ANGP03950 147 aaKnown RBP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 OR4E1P0C645 316 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 MGST1P10620 155 aaKnown RBP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 GPX4P36969 197 aaPredicted RBP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 CBX5P45973 191 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 SPCS3P61009 180 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 UBE2MP61081 183 aaKnown RBP2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 NMSQ5H8A3 153 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 C2orf66Q6UXQ4 117 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 TMPRSS11AQ6ZMR5 421 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 ACOT7LQ6ZUV0 252 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 LINC00269Q8N2A0 174 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 KIR2DL4Q99706 377 aa2.76□□□□□ -1.97
SBDSP1-204ENST00000453858 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms