RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 KRBOX1C9JBD0 128 aa8.74□□□□□ -1.01
PRPF40A-203ENST00000448428 GATA1P15976 413 aaPredicted RBP8.74□□□□□ -1.01
PRPF40A-203ENST00000448428 ZNF674Q2M3X9 581 aa8.74□□□□□ -1.01
PRPF40A-203ENST00000448428 FAM162BQ5T6X4 162 aa8.74□□□□□ -1.01
PRPF40A-203ENST00000448428 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
PRPF40A-203ENST00000448428 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 M0R036 132 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 SIVA1O15304 175 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 NXPH4O95158 308 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 S100A4P26447 101 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 SRIP30626 198 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 ASIPP42127 132 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 SULT1A2P50226 295 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 RAB5CP51148 216 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 TTC32Q5I0X7 151 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 PCNPQ8WW12 178 aaKnown RBP8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
PRPF40A-203ENST00000448428 A0A1W2PPQ1 181 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 GRIFINA4D1Z8 144 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 CIDEAO60543 219 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 ARMS2P0C7Q2 107 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 TNP2Q05952 138 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 AKAP14Q86UN6 197 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 SLC51BQ86UW2 128 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 SLC25A29Q8N8R3 303 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 GNG13Q9P2W3 67 aa8.72□□□□□ -1.01
PRPF40A-203ENST00000448428 TMSB15BA0A087X1C1 80 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 H3BVH4 76 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 LINC01559Q495D7 138 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 PIK3CD-AS1Q5SR53 167 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 BAGE2Q86Y30 109 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 MLST8Q9BVC4 326 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 JPT2Q9H910 190 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
PRPF40A-203ENST00000448428 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
PRPF40A-203ENST00000448428 A8MWV9 139 aa8.7□□□□□ -1.02
PRPF40A-203ENST00000448428 Q6ZSN1 163 aa8.7□□□□□ -1.02
PRPF40A-203ENST00000448428 C9orf62Q8N4C0 152 aa8.7□□□□□ -1.02
PRPF40A-203ENST00000448428 PARLQ9H300 379 aa8.7□□□□□ -1.02
PRPF40A-203ENST00000448428 TEX46H3BTG2 121 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 RPL35P42766 123 aaKnown RBP8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 ZFP2Q6ZN57 461 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 SH2D6Q7Z4S9 175 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 DERL1Q9BUN8 251 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 SAMD10Q9BYL1 202 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
PRPF40A-203ENST00000448428 MGST1P10620 155 aaKnown RBP8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 RPL19P84098 196 aaKnown RBP8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 RHOHQ15669 191 aa8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 WFDC10BQ8IUB3 73 aa8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 C11orf52Q96A22 123 aa8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
PRPF40A-203ENST00000448428 A0A1B0GVG6 124 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 BTF3P20290 206 aaKnown RBP8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 TIRAPP58753 221 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 LINC00315P59091 139 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 SYT8Q8NBV8 401 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 DNAH2Q9P225 4427 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 Q9UF83 564 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
PRPF40A-203ENST00000448428 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 RAB19A4D1S5 217 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 M0R381 172 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 PRR27Q6MZM9 219 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 SFRP2Q96HF1 295 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 FAT2Q9NYQ8 4349 aa8.66□□□□□ -1.02
PRPF40A-203ENST00000448428 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 CRYGDP07320 174 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 DNAH10OSP0CZ25 163 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 BCL2P10415 239 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 ZFP82Q8N141 532 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 ATP6V0E2Q8NHE4 81 aa8.65□□□□□ -1.02
PRPF40A-203ENST00000448428 HECTD4Q9Y4D8 3996 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 A0A087WWL8 130 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GAGE12JA6NER3 117 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 PDE6DO43924 150 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 IFNA1P01562 189 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 IGLV2-8P01709 118 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 MED14OSP0DP75 135 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 EVI2AP22794 236 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GAGE1Q13065 139 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GAGE4Q13068 117 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GAGE5Q13069 117 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 FAM74A4Q5TZK3 123 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 ALKAL2Q6UX46 152 aa8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
PRPF40A-203ENST00000448428 GTSF1LQ9H1H1 148 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms