RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 TTTY12Q9BZ98 90 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 IMUPQ9GZP8 106 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 TRIOO75962 3097 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 CACNA1HO95180 2353 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 IGHV1-2P23083 117 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 TMEM243Q9BU79 118 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 NACAE9PAV3 2078 aa12.24□□□□□ -0.45
SIK3-205ENST00000446921 IGKV3D-7A0A0C4DH55 119 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 TRIAP1O43715 76 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
SIK3-205ENST00000446921 RNF7Q9UBF6 113 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 PAPPA-AS1Q5QFB9 102 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 TRBV7-7A0A0K0K1E9 115 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 TEX36Q5VZQ5 186 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 SLC25A29Q8N8R3 303 aa12.23□□□□□ -0.45
SIK3-205ENST00000446921 RPL39LQ96EH5 51 aaKnown RBP12.23□□□□□ -0.45
SIK3-205ENST00000446921 IGHV3-66A0A0C4DH42 116 aa12.22□□□□□ -0.45
SIK3-205ENST00000446921 FAM19A4Q96LR4 140 aa12.22□□□□□ -0.45
SIK3-205ENST00000446921 CEP192Q8TEP8 1941 aa12.22□□□□□ -0.45
SIK3-205ENST00000446921 TRBV6-1A0A0K0K1D8 114 aa12.22□□□□□ -0.45
SIK3-205ENST00000446921 M0R1B8 84 aa12.21□□□□□ -0.45
SIK3-205ENST00000446921 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.45
SIK3-205ENST00000446921 H7C423 109 aa12.21□□□□□ -0.46
SIK3-205ENST00000446921 IGKV1-17P01599 117 aa12.21□□□□□ -0.46
SIK3-205ENST00000446921 H3BRN7 92 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 ACYP1P07311 99 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 CRYGBP07316 175 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 ZNF883P0CG24 379 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 S100A7L2Q5SY68 101 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 APC2O95996 2303 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 IGFBP4P22692 258 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 PHLDA3Q9Y5J5 127 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 FRYLO94915 3013 aa12.2□□□□□ -0.46
SIK3-205ENST00000446921 CRYGAP11844 174 aa12.19□□□□□ -0.46
SIK3-205ENST00000446921 UBE2E1P51965 193 aa12.19□□□□□ -0.46
SIK3-205ENST00000446921 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
SIK3-205ENST00000446921 SDIM1Q6ZPB5 146 aa12.19□□□□□ -0.46
SIK3-205ENST00000446921 ICOSQ9Y6W8 199 aa12.19□□□□□ -0.46
SIK3-205ENST00000446921 H3BT86 120 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 Q6ZT83 130 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 ZNF491Q8N8L2 437 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 TOMM6Q96B49 74 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 PCNX1Q96RV3 2341 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 IGLV2-18A0A075B6J9 118 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 P0DMU3 169 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 FAM231AP0DMU4 169 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 FAM231CP0DMU5 169 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 CCL8P80075 99 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 CCL21O00585 134 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 NDUFC2O95298 119 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 HOXB4P17483 251 aaPredicted RBP12.18□□□□□ -0.46
SIK3-205ENST00000446921 Q0VFX4 171 aa12.18□□□□□ -0.46
SIK3-205ENST00000446921 DNAL4O96015 105 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 NRACQ8N912 160 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 TNRC6BQ9UPQ9 1833 aaKnown RBP12.17□□□□□ -0.46
SIK3-205ENST00000446921 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 ABCA4P78363 2273 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 SPTBN2O15020 2390 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 TRGV5A0A0B4J1U4 118 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 CCL11P51671 97 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 TSPEAR-AS2P59090 65 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
SIK3-205ENST00000446921 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
SIK3-205ENST00000446921 A0A0B4J2C4 111 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 COX7A1P24310 79 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 ZNF833PQ6ZTB9 187 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 RBM3P98179 157 aaKnown RBP12.16□□□□□ -0.46
SIK3-205ENST00000446921 DYNAPQ8N1N2 210 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 A0A0U1RRA0 63 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
SIK3-205ENST00000446921 CGB3P0DN86 165 aa12.15□□□□□ -0.46
SIK3-205ENST00000446921 CGB7P0DN87 165 aa12.15□□□□□ -0.46
SIK3-205ENST00000446921 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
SIK3-205ENST00000446921 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
SIK3-205ENST00000446921 PDE6HQ13956 83 aa12.15□□□□□ -0.46
SIK3-205ENST00000446921 SERP2Q8N6R1 65 aa12.15□□□□□ -0.46
SIK3-205ENST00000446921 COX6B1P14854 86 aa12.14□□□□□ -0.47
SIK3-205ENST00000446921 CNOT1A5YKK6 2376 aaKnown RBP12.14□□□□□ -0.47
SIK3-205ENST00000446921 Q6ZSV7 163 aa12.14□□□□□ -0.47
SIK3-205ENST00000446921 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 PRAC2D3DTV9 90 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 TMEM86BQ8N661 226 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 C20orf197Q8N268 126 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 CCL17Q92583 94 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 DPH3P1Q9H4G8 78 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
SIK3-205ENST00000446921 IGKV3D-20A0A0C4DH25 116 aa12.12□□□□□ -0.47
SIK3-205ENST00000446921 C20orf173Q96LM9 149 aa12.12□□□□□ -0.47
SIK3-205ENST00000446921 C5orf67F2Z3F1 127 aa12.12□□□□□ -0.47
SIK3-205ENST00000446921 NDUFB3O43676 98 aa12.12□□□□□ -0.47
SIK3-205ENST00000446921 RPL18AQ02543 176 aaKnown RBP12.12□□□□□ -0.47
SIK3-205ENST00000446921 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms