RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 IGKV1-8A0A0C4DH67 115 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 A0A1B0GXF2 115 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 C16orf97H3BN30 126 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 LGALS9O00182 355 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 MRPS12O15235 138 aaKnown RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 NBR2O15453 112 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IGHMP01871 453 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 ARMS2P0C7Q2 107 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 HLA-DMBP28068 263 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 DLX1P56177 255 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 PCOLCEQ15113 449 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 RSPO1Q2MKA7 263 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 SPRNQ5BIV9 151 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 CEMP1Q6PRD7 247 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 SLC25A48Q6ZT89 311 aaKnown RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 PRNTQ86SH4 94 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 WDR31Q8NA23 367 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 C9orf85Q96MD7 179 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 ODF3Q96PU9 254 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 TMEM243Q9BU79 118 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 TTTY12Q9BZ98 90 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 IMUPQ9GZP8 106 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 KLK15Q9H2R5 256 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 PEMTQ9UBM1 199 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 PRO1854Q9UHT4 67 aa2.19□□□□□ -2.06
LIG4-203ENST00000442234 FLG2Q5D862 2391 aaPredicted RBP2.19□□□□□ -2.06
LIG4-203ENST00000442234 C15orf65H3BRN8 121 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 MYCNOSP40205 109 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 TIRAPP58753 221 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 CIRBPQ14011 172 aaKnown RBP2.18□□□□□ -2.06
LIG4-203ENST00000442234 VN1R4Q7Z5H5 301 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 TMEM131Q92545 1883 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 EML5Q05BV3 1969 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 CGB1A6NKQ9 187 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 KNCNA6PVL3 124 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 SHISA9B4DS77 424 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 SMKR1H3BMG3 65 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 IGLV2-8P01709 118 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 CRYGAP11844 174 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 EFNA4P52798 201 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 MAPKAPK5-AS1Q8N8E1 139 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 CCL17Q92583 94 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 C2orf48Q96LS8 159 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 FANCD2OSQ96PS1 177 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 MLST8Q9BVC4 326 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 HHLA3Q9XRX5 114 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 TRAV12-3A0A0B4J271 114 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1-12A0A0C4DH73 117 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1D-12P01611 117 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 CCL1P22362 96 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 PLNP26678 52 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 LOXL3P58215 753 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
LIG4-203ENST00000442234 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.18□□□□□ -2.06
LIG4-203ENST00000442234 C10orf113Q5VZT2 155 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 IGF2BP2-AS1Q96M15 143 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 AGPAT4-IT1Q9H0P7 198 aa2.18□□□□□ -2.06
LIG4-203ENST00000442234 TRAV8-3A0A0A6YYJ7 113 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 TRBV7-7A0A0K0K1E9 115 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 C5orf63A6NC05 138 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 ZNF561-AS1K7EIQ3 104 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 SPINT2O43291 252 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 ACYP1P07311 99 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 PRSS2P07478 247 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 PMAIP1Q13794 54 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 LY6EQ16553 131 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 MORN5Q5VZ52 161 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 Q6P435 159 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 Q6ZS49 121 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 NDUFA11Q86Y39 141 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 C9orf106Q8NAJ2 232 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM19A4Q96LR4 140 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 GFRA4Q9GZZ7 299 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 TRBV7-3A0A075B6L6 115 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IGHV4-30-2A0A087WSY4 118 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IGKV1-6A0A0C4DH72 117 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A20PA6NIJ5 464 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 PMS2P5A8MQ11 134 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 C17orf98A8MV24 154 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 UPK2O00526 184 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 TCRAP04437 139 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 IFI6P09912 130 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 CFC1BP0CG36 223 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 CFC1P0CG37 223 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 RNASE2P10153 161 aaKnown RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 SLC25A16P16260 332 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 CD40P25942 277 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 FKBP2P26885 142 aaKnown RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 UBE2D3P61077 147 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 HIST1H4AP62805 103 aaKnown RBP2.17□□□□□ -2.06
LIG4-203ENST00000442234 UBE2D2P62837 147 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 Q6ZT83 130 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 LYZL4Q96KX0 146 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 S1PR3Q99500 378 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 SHANK2-AS3Q9BTD1 123 aa2.17□□□□□ -2.06
LIG4-203ENST00000442234 SVEP1Q4LDE5 3571 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms