RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 K7EMI3 77 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 SPTAN1Q13813 2472 aaKnown RBP12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 IGHG2P01859 326 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 RNASE4P34096 147 aaKnown RBP12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 TOMM6Q96B49 74 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 K7ERJ3 54 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 BRI3O95415 125 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 PF4V1P10720 104 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 FOXI2Q6ZQN5 318 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 PIMREGQ9BSJ6 248 aa12.48□□□□□ -0.41
SEMA3B-207ENST00000441915 MGPP08493 103 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 TAL2Q16559 108 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 FAM19A4Q96LR4 140 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 IGHV4-61A0A0C4DH41 118 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 F6UB75 175 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 NCOR2Q9Y618 2525 aa12.47□□□□□ -0.41
SEMA3B-207ENST00000441915 H3BUX3 64 aa12.46□□□□□ -0.41
SEMA3B-207ENST00000441915 IGHV4-38-2P0DP08 117 aa12.46□□□□□ -0.41
SEMA3B-207ENST00000441915 PHLDA1Q8WV24 401 aaPredicted RBP12.46□□□□□ -0.41
SEMA3B-207ENST00000441915 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.41
SEMA3B-207ENST00000441915 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.42
SEMA3B-207ENST00000441915 GNRH2O43555 120 aa12.46□□□□□ -0.42
SEMA3B-207ENST00000441915 PPP1R17O96001 155 aa12.46□□□□□ -0.42
SEMA3B-207ENST00000441915 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.42
SEMA3B-207ENST00000441915 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 C2orf66Q6UXQ4 117 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 NEXN-AS1Q8NBZ9 246 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 OR11H1Q8NG94 326 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 OR11H2Q8NH07 326 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 SPANXB1Q9NS25 103 aaPredicted RBP12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 CHD8Q9HCK8 2581 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 RNASE3P12724 160 aaKnown RBP12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 HIST1H4GQ99525 98 aa12.45□□□□□ -0.42
SEMA3B-207ENST00000441915 BLCAPP62952 87 aa12.44□□□□□ -0.42
SEMA3B-207ENST00000441915 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
SEMA3B-207ENST00000441915 A6NDX4 124 aa12.44□□□□□ -0.42
SEMA3B-207ENST00000441915 GNLYP22749 145 aa12.44□□□□□ -0.42
SEMA3B-207ENST00000441915 AGRNO00468 2067 aa12.43□□□□□ -0.42
SEMA3B-207ENST00000441915 F8W1H4 67 aa12.43□□□□□ -0.42
SEMA3B-207ENST00000441915 LCNL1Q6ZST4 164 aa12.43□□□□□ -0.42
SEMA3B-207ENST00000441915 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
SEMA3B-207ENST00000441915 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 WFDC2Q14508 124 aa12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 RNF223E7ERA6 249 aa12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 CCL19Q99731 98 aa12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 SPAG8Q99932 426 aaPredicted RBP12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 GEMIN7Q9H840 131 aaKnown RBP12.42□□□□□ -0.42
SEMA3B-207ENST00000441915 Q6ZS46 218 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 IGLL5B9A064 214 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 E9PLD3 99 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 C12orf74Q32Q52 190 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 FAM159AQ6UWV7 190 aa12.41□□□□□ -0.42
SEMA3B-207ENST00000441915 SRD5A1P18405 259 aa12.4□□□□□ -0.42
SEMA3B-207ENST00000441915 ZNF479Q96JC4 524 aa12.4□□□□□ -0.42
SEMA3B-207ENST00000441915 COL12A1Q99715 3063 aa12.4□□□□□ -0.42
SEMA3B-207ENST00000441915 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 KLLNB2CW77 178 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 LINC01619G3V211 115 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 NXPH4O95158 308 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 ID1P41134 155 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 MUC4Q99102 2169 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
SEMA3B-207ENST00000441915 SH2D6Q7Z4S9 175 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 A0A087WW49 117 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 K7EMT4 169 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 MSMBP08118 114 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 PRADC1Q9BSG0 188 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 PRORYQ9H606 182 aa12.38□□□□□ -0.43
SEMA3B-207ENST00000441915 ATP5J2P56134 94 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 LINC00315P59091 139 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 MRPL16Q9NX20 251 aaKnown RBP12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 ITPR1Q14643 2758 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.437e-13■■□□□ 13.9
SEMA3B-207ENST00000441915 IGHV4-30-2A0A087WSY4 118 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
SEMA3B-207ENST00000441915 DUSP14O95147 198 aaKnown RBP12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 CD7P09564 240 aa12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 EDN2P20800 178 aa12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 CFHR3Q02985 330 aa12.36□□□□□ -0.43
SEMA3B-207ENST00000441915 KIR2DL4Q99706 377 aa12.35□□□□□ -0.43
SEMA3B-207ENST00000441915 TP53TG1Q9Y2A0 90 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms