RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 SVBPQ8N300 66 aa12.52□□□□□ -0.41
CCDC188-201ENST00000439765 OR10G8Q8NGN5 311 aa12.52□□□□□ -0.41
CCDC188-201ENST00000439765 KCNS1Q96KK3 526 aa12.52□□□□□ -0.41
CCDC188-201ENST00000439765 FRAS1Q86XX4 4008 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
CCDC188-201ENST00000439765 ZNF575Q86XF7 245 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 CLRN3Q8NCR9 226 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 GSN-AS1Q9NRJ2 163 aa12.51□□□□□ -0.41
CCDC188-201ENST00000439765 ATP6V1G1O75348 118 aa12.5□□□□□ -0.41
CCDC188-201ENST00000439765 RNF212Q495C1 297 aa12.5□□□□□ -0.41
CCDC188-201ENST00000439765 OR2D3Q8NGH3 330 aa12.5□□□□□ -0.41
CCDC188-201ENST00000439765 RPP21Q9H633 154 aaKnown RBP12.5□□□□□ -0.41
CCDC188-201ENST00000439765 APLNQ9ULZ1 77 aa12.5□□□□□ -0.41
CCDC188-201ENST00000439765 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 GNRH2O43555 120 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 SNAPINO95295 136 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 MT-ND4LP03901 98 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 ANAPC16Q96DE5 110 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 V9GYV3 84 aa12.49□□□□□ -0.41
CCDC188-201ENST00000439765 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 PPP1R2P9O14990 202 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 GAGE7O76087 117 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 TYMSP04818 313 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 RPS20P60866 119 aaKnown RBP12.48□□□□□ -0.41
CCDC188-201ENST00000439765 NDUFAF3Q9BU61 184 aa12.48□□□□□ -0.41
CCDC188-201ENST00000439765 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
CCDC188-201ENST00000439765 TCL1AP56279 114 aa12.47□□□□□ -0.41
CCDC188-201ENST00000439765 RHEBQ15382 184 aa12.47□□□□□ -0.41
CCDC188-201ENST00000439765 CT83Q5H943 113 aa12.47□□□□□ -0.41
CCDC188-201ENST00000439765 Q6ZTI0 123 aa12.47□□□□□ -0.41
CCDC188-201ENST00000439765 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 XKRY2A2RUG3 117 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 GRIFINA4D1Z8 144 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 ATP5G1P05496 136 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 CXCL1P09341 107 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 S100A1P23297 94 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 DAZ2Q13117 558 aaKnown RBP12.46□□□□□ -0.41
CCDC188-201ENST00000439765 DNLZQ5SXM8 178 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 TMEM88Q6PEY1 159 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 LINC00612Q8N6U2 182 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
CCDC188-201ENST00000439765 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.42
CCDC188-201ENST00000439765 A8MWL6 223 aa12.46□□□□□ -0.42
CCDC188-201ENST00000439765 F5H768 121 aa12.46□□□□□ -0.42
CCDC188-201ENST00000439765 GZMBP10144 247 aa12.46□□□□□ -0.42
CCDC188-201ENST00000439765 A0A087WWC5 75 aa12.45□□□□□ -0.42
CCDC188-201ENST00000439765 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
CCDC188-201ENST00000439765 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
CCDC188-201ENST00000439765 RPS10P5Q9NQ39 176 aa12.45□□□□□ -0.42
CCDC188-201ENST00000439765 MRPL16Q9NX20 251 aaKnown RBP12.45□□□□□ -0.42
CCDC188-201ENST00000439765 MDFICQ9P1T7 246 aa12.45□□□□□ -0.42
CCDC188-201ENST00000439765 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
CCDC188-201ENST00000439765 ASIPP42127 132 aa12.44□□□□□ -0.42
CCDC188-201ENST00000439765 ATRAIDQ6UW56 229 aa12.44□□□□□ -0.42
CCDC188-201ENST00000439765 TMEM242Q9NWH2 141 aa12.44□□□□□ -0.42
CCDC188-201ENST00000439765 DNAH6Q9C0G6 4158 aa12.44□□□□□ -0.42
CCDC188-201ENST00000439765 DNAH10Q8IVF4 4471 aa12.43□□□□□ -0.42
CCDC188-201ENST00000439765 TRGV2A0A075B6R0 118 aa12.43□□□□□ -0.42
CCDC188-201ENST00000439765 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
CCDC188-201ENST00000439765 GFRA4Q9GZZ7 299 aa12.43□□□□□ -0.42
CCDC188-201ENST00000439765 FAM231BA6NCW3 169 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 SPINK4O60575 86 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 IGLC6P0CF74 106 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
CCDC188-201ENST00000439765 GTSF1Q8WW33 167 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 IL36BQ9NZH7 164 aa12.42□□□□□ -0.42
CCDC188-201ENST00000439765 A0A1W2PPQ1 181 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 SMIM27A0A1W2PRY6 76 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 H3BVH4 76 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 ARMS2P0C7Q2 107 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 MED14OSP0DP75 135 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 SSBP4Q9BWG4 385 aaPredicted RBP12.41□□□□□ -0.42
CCDC188-201ENST00000439765 MUC4Q99102 2169 aa12.41□□□□□ -0.42
CCDC188-201ENST00000439765 HOXA5P20719 270 aa12.4□□□□□ -0.42
CCDC188-201ENST00000439765 FER1L6-AS1Q8NA97 138 aa12.4□□□□□ -0.42
CCDC188-201ENST00000439765 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
CCDC188-201ENST00000439765 SCRT2Q9NQ03 307 aa12.4□□□□□ -0.42
CCDC188-201ENST00000439765 HIGD1CA8MV81 97 aa12.4□□□□□ -0.43
CCDC188-201ENST00000439765 SNAI2O43623 268 aa12.4□□□□□ -0.43
CCDC188-201ENST00000439765 OR5AL1P0C617 328 aa12.4□□□□□ -0.43
CCDC188-201ENST00000439765 IMMP2LQ96T52 175 aa12.4□□□□□ -0.43
CCDC188-201ENST00000439765 F2Z2F3 143 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 LGALS9BQ3B8N2 356 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 LYZL1Q6UWQ5 148 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 NUP35Q8NFH5 326 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 SPXQ9BT56 116 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 TPPP3Q9BW30 176 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 NAT8BQ9UHF3 227 aa12.39□□□□□ -0.43
CCDC188-201ENST00000439765 TRAV26-1A0A087WT03 109 aa12.38□□□□□ -0.43
CCDC188-201ENST00000439765 C15orf53Q8NAA6 179 aa12.38□□□□□ -0.43
CCDC188-201ENST00000439765 PGLYRP4Q96LB8 373 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms