RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
GTF3A-204ENST00000438571 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 TRBV6-4A0A1B0GX49 114 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 PTTG1O95997 202 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 PFN1P07737 140 aaKnown RBP12.09□□□□□ -0.47
GTF3A-204ENST00000438571 ATP6V0CP27449 155 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 LELP1Q5T871 98 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 OR2G3Q8NGZ4 309 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 SH3BGRL3Q9H299 93 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 Q9UF83 564 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 ALG5Q9Y673 324 aa12.09□□□□□ -0.47
GTF3A-204ENST00000438571 SERTM2A0A1B0GWG4 89 aa12.08□□□□□ -0.48
GTF3A-204ENST00000438571 SUMO1P63165 101 aaKnown RBP12.08□□□□□ -0.48
GTF3A-204ENST00000438571 FLI1Q01543 452 aaPredicted RBP12.08□□□□□ -0.48
GTF3A-204ENST00000438571 SRRM2Q9UQ35 2752 aaKnown RBP12.07□□□□□ -0.48
GTF3A-204ENST00000438571 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 TAAR5O14804 337 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 SMUG1Q53HV7 270 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 ATP6V0E2Q8NHE4 81 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 NTN5Q8WTR8 489 aaPredicted RBP12.07□□□□□ -0.48
GTF3A-204ENST00000438571 LINC00479Q96M42 142 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 TMEM70Q9BUB7 260 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 GTSF1LQ9H1H1 148 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 PARLQ9H300 379 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 JPT2Q9H910 190 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
GTF3A-204ENST00000438571 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 GAGE1Q13065 139 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 GAGE4Q13068 117 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 GAGE5Q13069 117 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 Q5BKY6 102 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 CYB561D1Q8N8Q1 229 aa12.06□□□□□ -0.48
GTF3A-204ENST00000438571 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
GTF3A-204ENST00000438571 AQP10Q96PS8 301 aa12.05□□□□□ -0.48
GTF3A-204ENST00000438571 LECT2O14960 151 aa12.04□□□□□ -0.48
GTF3A-204ENST00000438571 CIDEAO60543 219 aa12.04□□□□□ -0.48
GTF3A-204ENST00000438571 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
GTF3A-204ENST00000438571 ZFP69Q49AA0 526 aa12.04□□□□□ -0.48
GTF3A-204ENST00000438571 PTH2Q96A98 100 aa12.04□□□□□ -0.48
GTF3A-204ENST00000438571 SAMD10Q9BYL1 202 aa12.04□□□□□ -0.48
GTF3A-204ENST00000438571 FAM229AH3BQW9 127 aa12.03□□□□□ -0.48
GTF3A-204ENST00000438571 K7EQM0 130 aa12.03□□□□□ -0.48
GTF3A-204ENST00000438571 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
GTF3A-204ENST00000438571 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
GTF3A-204ENST00000438571 C14orf178Q8N769 122 aaPredicted RBP12.03□□□□□ -0.48
GTF3A-204ENST00000438571 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
GTF3A-204ENST00000438571 TMEM167BQ9NRX6 74 aa12.03□□□□□ -0.48
GTF3A-204ENST00000438571 ARL2-SNX15V9GYD0 113 aa12.03□□□□□ -0.48
GTF3A-204ENST00000438571 CXorf1O96002 111 aa12.02□□□□□ -0.49
GTF3A-204ENST00000438571 LAGE3Q14657 143 aa12.02□□□□□ -0.49
GTF3A-204ENST00000438571 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
GTF3A-204ENST00000438571 OR2T35Q8NGX2 323 aa12.02□□□□□ -0.49
GTF3A-204ENST00000438571 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.49
GTF3A-204ENST00000438571 H3BVH4 76 aa12.01□□□□□ -0.49
GTF3A-204ENST00000438571 UBE2G2P60604 165 aa12.01□□□□□ -0.49
GTF3A-204ENST00000438571 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-204ENST00000438571 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
GTF3A-204ENST00000438571 Q86TA4 180 aa12.01□□□□□ -0.49
GTF3A-204ENST00000438571 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
GTF3A-204ENST00000438571 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
GTF3A-204ENST00000438571 RNF222A6NCQ9 220 aa12□□□□□ -0.49
GTF3A-204ENST00000438571 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
GTF3A-204ENST00000438571 SERF2P84101 59 aa12□□□□□ -0.49
GTF3A-204ENST00000438571 LINC01620Q4KN68 170 aa12□□□□□ -0.49
GTF3A-204ENST00000438571 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 A8MWV9 139 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 MBP02144 154 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 ASIPP42127 132 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 CRIP1P50238 77 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 FGF8P55075 233 aaPredicted RBP11.99□□□□□ -0.49
GTF3A-204ENST00000438571 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 Q6ZNX1 250 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 Q6ZSA8 131 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 TNFSF18Q9UNG2 199 aa11.99□□□□□ -0.49
GTF3A-204ENST00000438571 M0R036 132 aa11.98□□□□□ -0.49
GTF3A-204ENST00000438571 PEX7O00628 323 aa11.98□□□□□ -0.49
GTF3A-204ENST00000438571 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
GTF3A-204ENST00000438571 LRP1Q07954 4544 aaKnown RBP11.98□□□□□ -0.49
GTF3A-204ENST00000438571 FAT3Q8TDW7 4589 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 PKHD1L1Q86WI1 4243 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 A0A1B0GVG6 124 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 BAALCQ8WXS3 180 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 MED28Q9H204 178 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 IL36BQ9NZH7 164 aa11.97□□□□□ -0.49
GTF3A-204ENST00000438571 CTXND1A0A1B0GTU2 59 aa11.96□□□□□ -0.49
GTF3A-204ENST00000438571 FAM74A7A6NL05 159 aa11.96□□□□□ -0.49
GTF3A-204ENST00000438571 FABP5P3A8MUU1 101 aa11.96□□□□□ -0.49
GTF3A-204ENST00000438571 B4DEV8 164 aa11.96□□□□□ -0.49
GTF3A-204ENST00000438571 IFNA7P01567 189 aa11.96□□□□□ -0.49
GTF3A-204ENST00000438571 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 SH2D1AO60880 128 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 C1QBP02746 253 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
GTF3A-204ENST00000438571 PIK3CD-AS1Q5SR53 167 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms