RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
HMGB3P10-201ENST00000434734 BET1LQ9NYM9 111 aa2.96□□□□□ -1.94
HMGB3P10-201ENST00000434734 SLIT3O75094 1523 aa2.96□□□□□ -1.94
HMGB3P10-201ENST00000434734 FYCO1Q9BQS8 1478 aa2.96□□□□□ -1.94
HMGB3P10-201ENST00000434734 SBF2Q86WG5 1849 aa2.96□□□□□ -1.94
HMGB3P10-201ENST00000434734 RHOHQ15669 191 aa2.95□□□□□ -1.94
HMGB3P10-201ENST00000434734 IQCJQ1A5X6 159 aa2.95□□□□□ -1.94
HMGB3P10-201ENST00000434734 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
HMGB3P10-201ENST00000434734 LAMB4A4D0S4 1761 aa2.95□□□□□ -1.94
HMGB3P10-201ENST00000434734 LAMB2P55268 1798 aa2.95□□□□□ -1.94
HMGB3P10-201ENST00000434734 IGLV4-60A0A075B6I1 120 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 IGKCP01834 107 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 CCKP06307 115 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 CBLN1P23435 193 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 TDRG1Q3Y452 100 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 C9orf116Q5BN46 136 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 SLC48A1Q6P1K1 146 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 PMCHL2Q9BQD1 86 aa2.94□□□□□ -1.94
HMGB3P10-201ENST00000434734 PTPRDP23468 1912 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 PTPRMP28827 1452 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 ANKRD36BQ8N2N9 1353 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 NMBP08949 121 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 POLR2JP52435 117 aaKnown RBP2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 CNBPP62633 177 aaKnown RBP2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 PDE6HQ13956 83 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 C2orf82Q6UX34 121 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 COMMD6Q7Z4G1 85 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 SCAPERQ9BY12 1400 aa2.93□□□□□ -1.94
HMGB3P10-201ENST00000434734 COL4A5P29400 1685 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 GAPVD1Q14C86 1478 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 PATJQ8NI35 1801 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 Q1T7F1 81 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 C1orf137Q5JT78 98 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 RPL7L1Q6DKI1 246 aaKnown RBP2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 C10orf82Q8WW14 230 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 MYO18AQ92614 2054 aaKnown RBP2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 UNC13CQ8NB66 2214 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 ATRXP46100 2492 aa2.92□□□□□ -1.94
HMGB3P10-201ENST00000434734 TRAV2A0A0B4J234 112 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 CXorf51AA0A1B0GTR3 108 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 K7EP34 96 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 ESPL1Q14674 2120 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 PEA15Q15121 130 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 IGFBP7Q16270 282 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 ZGRF1Q86YA3 2104 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 RTEL1-TNFRSF6BF6WH68 1400 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 BAZ2BQ9UIF8 2168 aaKnown RBP2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 ZFHX2Q9C0A1 2572 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 DNMBPQ6XZF7 1577 aa2.91□□□□□ -1.94
HMGB3P10-201ENST00000434734 MAP3K1Q13233 1512 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 A6NIN4 97 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 NUPR1O60356 82 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 KRTAP13-2Q52LG2 175 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 LYPD1Q8N2G4 141 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 C20orf78Q9BR46 151 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 GOLGA3Q08378 1498 aa2.9□□□□□ -1.95
HMGB3P10-201ENST00000434734 LAMB1P07942 1786 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 TCHHQ07283 1943 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 PCDH15Q96QU1 1955 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 HCG22E2RYF7 251 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 MON2Q7Z3U7 1717 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 CMTM2Q8TAZ6 248 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 FAM213BQ8TBF2 198 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 TSLPQ969D9 159 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 MRPL35Q9NZE8 188 aaKnown RBP2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 IFT140Q96RY7 1462 aa2.89□□□□□ -1.95
HMGB3P10-201ENST00000434734 TOPAZ1Q8N9V7 1692 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 MARF1Q9Y4F3 1742 aaKnown RBP2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 TMEM30CPA0ZSE6 113 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 SDHAF1A6NFY7 115 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 RNASE2P10153 161 aaKnown RBP2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 FAUP35544 74 aaKnown RBP2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 GNG11P61952 73 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 ZNF431Q8TF32 576 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 PPDPFLQ8WWR9 84 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 LTBP2Q14767 1821 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 CHD1O14646 1710 aa2.88□□□□□ -1.95
HMGB3P10-201ENST00000434734 RGPD4Q7Z3J3 1758 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 FREM1Q5H8C1 2179 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 MED13Q9UHV7 2174 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRBV6-8A0A0A6YYG3 113 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 F8W1H4 67 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 IGHV3-33P01772 117 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 ASIPP42127 132 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 LINC00315P59091 139 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 ELOBQ15370 118 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 ALKAL2Q6UX46 152 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 ZNF720Q7Z2F6 126 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms