RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SBSPONQ8IVN8 264 aa19.1■□□□□ 0.65
TMEM248-205ENST00000433271 BTF3L4Q96K17 158 aa19.1■□□□□ 0.65
TMEM248-205ENST00000433271 MRAPQ8TCY5 172 aa19.09■□□□□ 0.65
TMEM248-205ENST00000433271 C16orf74Q96GX8 76 aa19.09■□□□□ 0.65
TMEM248-205ENST00000433271 YPEL4Q96NS1 127 aa19.09■□□□□ 0.65
TMEM248-205ENST00000433271 GSN-AS1Q9NRJ2 163 aa19.09■□□□□ 0.65
TMEM248-205ENST00000433271 CNFNQ9BYD5 112 aa19.08■□□□□ 0.65
TMEM248-205ENST00000433271 PHLDA3Q9Y5J5 127 aa19.08■□□□□ 0.65
TMEM248-205ENST00000433271 WDR73Q6P4I2 378 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 BORCS7Q96B45 105 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 OVOL2Q9BRP0 275 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 A0A1B0GUT8 65 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 SPINK4O60575 86 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 OR10AG1Q8NH19 301 aa19.07■□□□□ 0.64
TMEM248-205ENST00000433271 MUC21A0A0G2JKD1 596 aa19.06■□□□□ 0.64
TMEM248-205ENST00000433271 MUC21A0A140T8X8 626 aa19.06■□□□□ 0.64
TMEM248-205ENST00000433271 TRBV24-1A0A075B6N3 115 aa19.05■□□□□ 0.64
TMEM248-205ENST00000433271 CACNG7P62955 275 aa19.05■□□□□ 0.64
TMEM248-205ENST00000433271 SPXQ9BT56 116 aa19.05■□□□□ 0.64
TMEM248-205ENST00000433271 IGHV4-4A0A075B6R2 117 aa19.04■□□□□ 0.64
TMEM248-205ENST00000433271 TGIF2-C20orf24A0A0A6YYL0 155 aa19.04■□□□□ 0.64
TMEM248-205ENST00000433271 MIFP14174 115 aa19.04■□□□□ 0.64
TMEM248-205ENST00000433271 SPANXN1Q5VSR9 72 aa19.04■□□□□ 0.64
TMEM248-205ENST00000433271 ATP5L2Q7Z4Y8 100 aa19.04■□□□□ 0.64
TMEM248-205ENST00000433271 PLAC8L1A1L4L8 177 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 SNURFLB1AK76 121 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 NTF3P20783 257 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 SSTP61278 116 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 RIGQ13278 110 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 IL17DQ8TAD2 202 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 MRPL54Q6P161 138 aaKnown RBP19.03■□□□□ 0.64
TMEM248-205ENST00000433271 RETNQ9HD89 108 aa19.03■□□□□ 0.64
TMEM248-205ENST00000433271 MUC4Q99102 2169 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 M0R2P5 195 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 M0R381 172 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 NXPH4O95158 308 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 DAZ2Q13117 558 aaKnown RBP19.02■□□□□ 0.64
TMEM248-205ENST00000433271 ZFP82Q8N141 532 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 TM2D3Q9BRN9 247 aa19.02■□□□□ 0.64
TMEM248-205ENST00000433271 DEFA6Q01524 100 aa19.01■□□□□ 0.63
TMEM248-205ENST00000433271 TWIST1Q15672 202 aa19.01■□□□□ 0.63
TMEM248-205ENST00000433271 DMRTA1Q5VZB9 504 aa19.01■□□□□ 0.63
TMEM248-205ENST00000433271 PTH2Q96A98 100 aa19.01■□□□□ 0.63
TMEM248-205ENST00000433271 SPATA25Q9BR10 227 aa19.01■□□□□ 0.63
TMEM248-205ENST00000433271 A0A1B0GW15 77 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 A0A1B0GXF2 115 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 COLCA2A8K830 154 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 Q8NAQ8 132 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 SYT8Q8NBV8 401 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 FAM210BQ96KR6 192 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 MEGF8Q7Z7M0 2845 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 IGHV4-28A0A0C4DH34 117 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 HBBP68871 147 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 ZNF876PQ49A33 203 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 MSRB1Q9NZV6 116 aa19■□□□□ 0.63
TMEM248-205ENST00000433271 RASL11AQ6T310 242 aa18.99■□□□□ 0.63
TMEM248-205ENST00000433271 NOP10Q9NPE3 64 aaKnown RBP18.99■□□□□ 0.63
TMEM248-205ENST00000433271 PIK3CD-AS1Q5SR53 167 aa18.98■□□□□ 0.63
TMEM248-205ENST00000433271 CAMPP49913 170 aa18.97■□□□□ 0.63
TMEM248-205ENST00000433271 EMP1P54849 157 aa18.97■□□□□ 0.63
TMEM248-205ENST00000433271 LGALS9BQ3B8N2 356 aa18.97■□□□□ 0.63
TMEM248-205ENST00000433271 B9D2Q9BPU9 175 aa18.97■□□□□ 0.63
TMEM248-205ENST00000433271 S100A8P05109 93 aa18.96■□□□□ 0.63
TMEM248-205ENST00000433271 RASL10AQ92737 203 aa18.96■□□□□ 0.63
TMEM248-205ENST00000433271 NDUFAF3Q9BU61 184 aa18.95■□□□□ 0.62
TMEM248-205ENST00000433271 MRPL16Q9NX20 251 aaKnown RBP18.95■□□□□ 0.62
TMEM248-205ENST00000433271 DEFB4AO15263 64 aa18.94■□□□□ 0.62
TMEM248-205ENST00000433271 COX19Q49B96 90 aa18.94■□□□□ 0.62
TMEM248-205ENST00000433271 TRGV1A0A0A0MS02 117 aa18.93■□□□□ 0.62
TMEM248-205ENST00000433271 TRGC1P0CF51 173 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 Q6ZTI0 123 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 ZMAT4Q9H898 229 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 RAB5AP20339 215 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 GATD1Q8NB37 220 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 AP1S3Q96PC3 154 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 GNB1LQ9BYB4 327 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 TMEM191AQ9H0A3 160 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 TENM3Q9P273 2699 aa18.92■□□□□ 0.62
TMEM248-205ENST00000433271 EVI2AP22794 236 aa18.91■□□□□ 0.62
TMEM248-205ENST00000433271 RAB4BP61018 213 aa18.91■□□□□ 0.62
TMEM248-205ENST00000433271 TMEM136Q6ZRR5 245 aa18.91■□□□□ 0.62
TMEM248-205ENST00000433271 SMIM15Q7Z3B0 74 aa18.91■□□□□ 0.62
TMEM248-205ENST00000433271 LYRM9A8MSI8 78 aa18.9■□□□□ 0.62
TMEM248-205ENST00000433271 A8MWV9 139 aa18.89■□□□□ 0.62
TMEM248-205ENST00000433271 C11orf68Q9H3H3 251 aaKnown RBP18.89■□□□□ 0.62
TMEM248-205ENST00000433271 JPT2Q9H910 190 aa18.89■□□□□ 0.62
TMEM248-205ENST00000433271 DKK2Q9UBU2 259 aa18.89■□□□□ 0.62
TMEM248-205ENST00000433271 FAM222AQ5U5X8 452 aa18.89■□□□□ 0.61
TMEM248-205ENST00000433271 LINC00612Q8N6U2 182 aa18.89■□□□□ 0.61
TMEM248-205ENST00000433271 C14orf178Q8N769 122 aaPredicted RBP18.89■□□□□ 0.61
TMEM248-205ENST00000433271 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.89■□□□□ 0.61
TMEM248-205ENST00000433271 MT-ND6P03923 174 aa18.88■□□□□ 0.61
TMEM248-205ENST00000433271 GAGE12BA1L429 117 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 GAGE7O76087 117 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 HLA-DQA1P01909 254 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 GAGE12FP0CL80 117 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 GAGE12GP0CL81 117 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 GAGE12IP0CL82 117 aa18.87■□□□□ 0.61
TMEM248-205ENST00000433271 SMIM17P0DL12 118 aa18.86■□□□□ 0.61
TMEM248-205ENST00000433271 RPS10P46783 165 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms