RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 MT-ND4LP03901 98 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 ARMS2P0C7Q2 107 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 IGLC6P0CF74 106 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 LINC00612Q8N6U2 182 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 TSKUQ8WUA8 353 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 PTH2Q96A98 100 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 TPPP3Q9BW30 176 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
CHD4-202ENST00000430771 V9GYV3 84 aa7.86□□□□□ -1.15
CHD4-202ENST00000430771 TRGV2A0A075B6R0 118 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GAGE12BA1L429 117 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 F2Z2F3 143 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GAGE7O76087 117 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GAGE12FP0CL80 117 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GAGE12GP0CL81 117 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GAGE12IP0CL82 117 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 DEFB130BP0DP73 79 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 DEFB130AP0DP74 79 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 GZMBP10144 247 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 CTRLP40313 264 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 CACNG7P62955 275 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 RHEBQ15382 184 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 RNF212Q495C1 297 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 PIK3CD-AS1Q5SR53 167 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 SPANXN1Q5VSR9 72 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 Q6ZTI0 123 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 SLC7A5P1Q8MH63 180 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 SVBPQ8N300 66 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 RASL10AQ92737 203 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 BORCS7Q96B45 105 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 C18orf15Q96N68 181 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 SSBP4Q9BWG4 385 aaPredicted RBP7.85□□□□□ -1.15
CHD4-202ENST00000430771 SCRT2Q9NQ03 307 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 COL7A1Q02388 2944 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 TENM3Q9P273 2699 aa7.85□□□□□ -1.15
CHD4-202ENST00000430771 NXPH4O95158 308 aa7.84□□□□□ -1.15
CHD4-202ENST00000430771 SNAPINO95295 136 aa7.84□□□□□ -1.15
CHD4-202ENST00000430771 APOC3P02656 99 aa7.84□□□□□ -1.15
CHD4-202ENST00000430771 ZNF876PQ49A33 203 aa7.84□□□□□ -1.15
CHD4-202ENST00000430771 WWC2-AS2Q96NR7 200 aa7.84□□□□□ -1.15
CHD4-202ENST00000430771 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 A8MWV9 139 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 M0R381 172 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 ATP5G1P05496 136 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 NANOS2P60321 138 aaKnown RBP7.83□□□□□ -1.16
CHD4-202ENST00000430771 C12orf74Q32Q52 190 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 OR10AG1Q8NH19 301 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 AP1S3Q96PC3 154 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 CTDSP1Q9GZU7 261 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 NAT8BQ9UHF3 227 aa7.83□□□□□ -1.16
CHD4-202ENST00000430771 NBEAL2Q6ZNJ1 2754 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 TRAV10A0A0B4J240 114 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 RHODO00212 210 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 TRGC1P0CF51 173 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 LYZL1Q6UWQ5 148 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 Q6ZTC4 211 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 ZNF575Q86XF7 245 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 GTSF1Q8WW33 167 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 CNFNQ9BYD5 112 aa7.82□□□□□ -1.16
CHD4-202ENST00000430771 MUC4Q99102 2169 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 SMIM27A0A1W2PRY6 76 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 CIDEAO60543 219 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 FOXA3P55318 350 aaPredicted RBP7.81□□□□□ -1.16
CHD4-202ENST00000430771 WDR73Q6P4I2 378 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 KCNIP4Q6PIL6 250 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 OR4C5Q8NGB2 326 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
CHD4-202ENST00000430771 DNAH7Q8WXX0 4024 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 IGHV4-4A0A075B6R2 117 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 A0A087WWC5 75 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 A0A1B0GUT8 65 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 C7orf77A4D0Y5 90 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 RS1O15537 224 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 SMIM17P0DL12 118 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 HTN3P15516 51 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 DMRTA1Q5VZB9 504 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 NUP35Q8NFH5 326 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 IMMP2LQ96T52 175 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 RPS10P5Q9NQ39 176 aa7.8□□□□□ -1.16
CHD4-202ENST00000430771 STAB2Q8WWQ8 2551 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 IGHV3-53P01767 116 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 S100PP25815 95 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 RIGQ13278 110 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 TWIST1Q15672 202 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 FAM74A4Q5TZK3 123 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 MUC7Q8TAX7 377 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 PHLDA1Q8WV24 401 aaPredicted RBP7.79□□□□□ -1.16
CHD4-202ENST00000430771 TMEM242Q9NWH2 141 aa7.79□□□□□ -1.16
CHD4-202ENST00000430771 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms