RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 LOC100131303A0A0U1RQF7 123 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 B4DEV8 164 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 RS1O15537 224 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 RNASE3P12724 160 aaKnown RBP12.02□□□□□ -0.49
NUP50-208ENST00000430547 RHOHQ15669 191 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 PTH2Q96A98 100 aa12.02□□□□□ -0.49
NUP50-208ENST00000430547 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 EVI2AP22794 236 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 AKR1C3P42330 323 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 WFDC10BQ8IUB3 73 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 SLC25A29Q8N8R3 303 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 ZC2HC1AQ96GY0 325 aa12.01□□□□□ -0.49
NUP50-208ENST00000430547 A0A1B0GV50 99 aa12□□□□□ -0.49
NUP50-208ENST00000430547 TRBV6-4A0A1B0GX49 114 aa12□□□□□ -0.49
NUP50-208ENST00000430547 PAGE4O60829 102 aa12□□□□□ -0.49
NUP50-208ENST00000430547 MGST1P10620 155 aaKnown RBP12□□□□□ -0.49
NUP50-208ENST00000430547 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
NUP50-208ENST00000430547 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
NUP50-208ENST00000430547 A8MWV9 139 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 K7EP13 123 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 M0R036 132 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 TPT1P13693 172 aaKnown RBP11.99□□□□□ -0.49
NUP50-208ENST00000430547 LGALSLQ3ZCW2 172 aaPredicted RBP11.99□□□□□ -0.49
NUP50-208ENST00000430547 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 MBD3L1Q8WWY6 194 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
NUP50-208ENST00000430547 DNAH11Q96DT5 4516 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 TRBV6-1A0A0K0K1D8 114 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 H3BVH4 76 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 SH2D1AO60880 128 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 TMUB2Q71RG4 321 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 SYT8Q8NBV8 401 aa11.98□□□□□ -0.49
NUP50-208ENST00000430547 EREGO14944 169 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 LTAP01374 205 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 DNAH10OSP0CZ25 163 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 TIRAPP58753 221 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 PIK3CD-AS1Q5SR53 167 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
NUP50-208ENST00000430547 DYNC1H1Q14204 4646 aaKnown RBP11.96□□□□□ -0.49
NUP50-208ENST00000430547 TRAV8-6A0A0B4J262 113 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 KRBOX1C9JBD0 128 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 S100A9P06702 114 aaKnown RBP11.96□□□□□ -0.49
NUP50-208ENST00000430547 CRIP1P50238 77 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 ERVFC1-1P60608 527 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 ZFP2Q6ZN57 461 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 PARLQ9H300 379 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
NUP50-208ENST00000430547 GRIFINA4D1Z8 144 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 CRYGDP07320 174 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 ARMS2P0C7Q2 107 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 ZNF674Q2M3X9 581 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 DNLZQ5SXM8 178 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
NUP50-208ENST00000430547 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
NUP50-208ENST00000430547 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
NUP50-208ENST00000430547 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
NUP50-208ENST00000430547 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
NUP50-208ENST00000430547 EIF5AL1Q6IS14 154 aaKnown RBP11.94□□□□□ -0.5
NUP50-208ENST00000430547 ATP6V0E2Q8NHE4 81 aa11.94□□□□□ -0.5
NUP50-208ENST00000430547 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
NUP50-208ENST00000430547 SCO2A0A1W2PP80 73 aa11.93□□□□□ -0.5
NUP50-208ENST00000430547 RHODO00212 210 aa11.93□□□□□ -0.5
NUP50-208ENST00000430547 TEX46H3BTG2 121 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 LELP1Q5T871 98 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 FAM74A4Q5TZK3 123 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 DMRTA1Q5VZB9 504 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 GTSF1LQ9H1H1 148 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 JPT2Q9H910 190 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
NUP50-208ENST00000430547 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 M0R381 172 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 CDK2AP2O75956 126 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 RAB5CP51148 216 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 KRTAP10-2P60368 255 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 GAGE1Q13065 139 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 GAGE4Q13068 117 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 GAGE5Q13069 117 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 LINC01556Q5JQF7 62 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 BAGE2Q86Y30 109 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 ZFP82Q8N141 532 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
NUP50-208ENST00000430547 Q6ZSN1 163 aa11.9□□□□□ -0.5
NUP50-208ENST00000430547 TCTE3Q8IZS6 198 aa11.9□□□□□ -0.5
NUP50-208ENST00000430547 SAMD10Q9BYL1 202 aa11.9□□□□□ -0.5
NUP50-208ENST00000430547 PSCAO43653 123 aa11.89□□□□□ -0.51
NUP50-208ENST00000430547 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
NUP50-208ENST00000430547 A0A087WWL8 130 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
NUP50-208ENST00000430547 UFSP1Q6NVU6 142 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms