RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 ATP5LO75964 103 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 Q8N9W7 124 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 SIVA1O15304 175 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 SPINK8P0C7L1 97 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 SRD5A1P18405 259 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 DPF1Q92782 380 aa11.47□□□□□ -0.57
CACTIN-203ENST00000429344 B5MCH6 92 aa11.46□□□□□ -0.57
CACTIN-203ENST00000429344 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.57
CACTIN-203ENST00000429344 IGHG4P01861 327 aa11.46□□□□□ -0.58
CACTIN-203ENST00000429344 CD300EQ496F6 205 aaPredicted RBP11.46□□□□□ -0.58
CACTIN-203ENST00000429344 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.58
CACTIN-203ENST00000429344 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.58
CACTIN-203ENST00000429344 Q8N8P6 123 aa11.46□□□□□ -0.58
CACTIN-203ENST00000429344 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
CACTIN-203ENST00000429344 IGHV1-69DA0A0B4J2H0 117 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 IGLL5B9A064 214 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 F5H697 171 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 IGHV1-69P01742 117 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 RPL39LQ96EH5 51 aaKnown RBP11.45□□□□□ -0.58
CACTIN-203ENST00000429344 METTL26Q96S19 204 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 INSL3P51460 131 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
CACTIN-203ENST00000429344 CELSR1Q9NYQ6 3014 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 MSMBP08118 114 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 H7C2G1 150 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 SRSF1Q07955 248 aaKnown RBP eCLIP11.44□□□□□ -0.581e-6■■□□□ 13.5
CACTIN-203ENST00000429344 GAGE13Q4V321 117 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 NACAE9PAV3 2078 aa11.44□□□□□ -0.58
CACTIN-203ENST00000429344 F6UB75 175 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 PGPEP1Q9NXJ5 209 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 SMIM20Q8N5G0 67 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 TRAV41A0A0B4J266 112 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 BUB3O43684 328 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 PSMB2P49721 201 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 C8orf86Q6ZUL3 223 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 CITED1Q99966 193 aa11.43□□□□□ -0.58
CACTIN-203ENST00000429344 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
CACTIN-203ENST00000429344 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
CACTIN-203ENST00000429344 ZNF815PA8K554 130 aa11.42□□□□□ -0.58
CACTIN-203ENST00000429344 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
CACTIN-203ENST00000429344 PAX8Q06710 450 aa11.42□□□□□ -0.58
CACTIN-203ENST00000429344 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
CACTIN-203ENST00000429344 B4DSR2 109 aa11.41□□□□□ -0.58
CACTIN-203ENST00000429344 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
CACTIN-203ENST00000429344 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
CACTIN-203ENST00000429344 CRYBG3Q68DQ2 2970 aa11.41□□□□□ -0.58
CACTIN-203ENST00000429344 FAM74A4Q5TZK3 123 aa11.41□□□□□ -0.58
CACTIN-203ENST00000429344 KHDC1LQ5JSQ8 128 aa11.4□□□□□ -0.58
CACTIN-203ENST00000429344 FOXI2Q6ZQN5 318 aa11.4□□□□□ -0.58
CACTIN-203ENST00000429344 FAM110DQ8TAY7 271 aaPredicted RBP11.4□□□□□ -0.58
CACTIN-203ENST00000429344 A0A087WX48 190 aa11.4□□□□□ -0.58
CACTIN-203ENST00000429344 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
CACTIN-203ENST00000429344 SYT8Q8NBV8 401 aa11.4□□□□□ -0.58
CACTIN-203ENST00000429344 RNF223E7ERA6 249 aa11.4□□□□□ -0.59
CACTIN-203ENST00000429344 SLC25A16P16260 332 aa11.4□□□□□ -0.59
CACTIN-203ENST00000429344 LINC01559Q495D7 138 aa11.4□□□□□ -0.59
CACTIN-203ENST00000429344 DUX5Q96PT3 197 aa11.4□□□□□ -0.59
CACTIN-203ENST00000429344 SPAG8Q99932 426 aaPredicted RBP11.4□□□□□ -0.59
CACTIN-203ENST00000429344 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 HOXA3O43365 443 aaPredicted RBP11.39□□□□□ -0.59
CACTIN-203ENST00000429344 MRAP2Q96G30 205 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 SMPXQ9UHP9 88 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 UTP20O75691 2785 aaKnown RBP11.39□□□□□ -0.59
CACTIN-203ENST00000429344 HERV-K104P63124 156 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 PRR9Q5T870 116 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 PTH2Q96A98 100 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 SLC50A1Q9BRV3 221 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 H7C1H1 209 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 GNRH2O43555 120 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
CACTIN-203ENST00000429344 BLCAPP62952 87 aa11.38□□□□□ -0.59
CACTIN-203ENST00000429344 BBC3Q96PG8 261 aaPredicted RBP11.38□□□□□ -0.59
CACTIN-203ENST00000429344 SMIM2Q9BVW6 85 aa11.38□□□□□ -0.59
CACTIN-203ENST00000429344 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
CACTIN-203ENST00000429344 F8VRH5 84 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 C20orf78Q9BR46 151 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 HIGD1BQ9P298 99 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 A0A087WWL8 130 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 SUMO2P61956 95 aaKnown RBP11.37□□□□□ -0.59
CACTIN-203ENST00000429344 ZNF575Q86XF7 245 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 C3orf56Q8N813 242 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 OR10J6PQ8NGY7 276 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 TRBV20-1A0A075B6N2 111 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 MYMXA0A1B0GTQ4 84 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 HTN1P15515 57 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 PLNP26678 52 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 TTC32Q5I0X7 151 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 Q8N6K4 173 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 NRACQ8N912 160 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 CCDC140Q96MF4 163 aa11.37□□□□□ -0.59
CACTIN-203ENST00000429344 SPANXB1Q9NS25 103 aaPredicted RBP11.37□□□□□ -0.59
CACTIN-203ENST00000429344 PRRC2AP48634 2157 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms