RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 LINC00322Q6ZN03 302 aaPredicted RBP3.74□□□□□ -1.81
LINC00458-202ENST00000427299 TTC9CQ8N5M4 171 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 OR8A1Q8NGG7 326 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 BSNQ9UPA5 3926 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 COL6A3P12111 3177 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 CACNA1HO95180 2353 aa3.74□□□□□ -1.81
LINC00458-202ENST00000427299 WDFY4Q6ZS81 3184 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 IGLV7-46A0A075B6I9 117 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 IGHV3-21A0A0B4J1V1 117 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 LINC01546A6NGU7 62 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 LY6LH3BQJ8 138 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 K7EMI3 77 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 K7EP34 96 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 FCN3O75636 299 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 IGLC6P0CF74 106 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 SMIM17P0DL12 118 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 APELAP0DMC3 54 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 SLC25A16P16260 332 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 SAA4P35542 130 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 RBX1P62877 108 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 CACNG7P62955 275 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 LDLRAD2Q5SZI1 272 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 LYZL1Q6UWQ5 148 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 C2orf91Q6ZV80 131 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
LINC00458-202ENST00000427299 BOD1L2Q8IYS8 172 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 LY6G5BQ8NDX9 201 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 VPS25Q9BRG1 176 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 CST9LQ9H4G1 147 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 SIGLEC8Q9NYZ4 499 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 HIGD1BQ9P298 99 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 TIMM8BQ9Y5J9 83 aaPredicted RBP3.73□□□□□ -1.81
LINC00458-202ENST00000427299 RP1L1Q8IWN7 2480 aaPredicted RBP3.73□□□□□ -1.81
LINC00458-202ENST00000427299 PRRC2CQ9Y520 2896 aaKnown RBP3.73□□□□□ -1.81
LINC00458-202ENST00000427299 ACACAQ13085 2346 aa3.73□□□□□ -1.81
LINC00458-202ENST00000427299 ANKHD1Q8IWZ3 2542 aaKnown RBP3.73□□□□□ -1.81
LINC00458-202ENST00000427299 PCNX1Q96RV3 2341 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 CNOT1A5YKK6 2376 aaKnown RBP3.72□□□□□ -1.81
LINC00458-202ENST00000427299 OR2T8A6NH00 312 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 FABP5P3A8MUU1 101 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 EPM2AB3EWF7 344 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 J3QR89 54 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 FABP2P12104 132 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 PRTN3P24158 256 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 PLNP26678 52 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 IFI27P40305 119 aaPredicted RBP3.72□□□□□ -1.81
LINC00458-202ENST00000427299 UCNP55089 124 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 TAL2Q16559 108 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
LINC00458-202ENST00000427299 OCIAD2Q56VL3 154 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 TCTEX1D4Q5JR98 221 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 TMEM78Q5T7P6 136 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 LYRM7Q5U5X0 104 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 SAMD13Q5VXD3 122 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 ADAMTSL5Q6ZMM2 481 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 LINC00173Q6ZV60 143 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 AMN1Q8IY45 258 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 EEF1AKMT3Q96AZ1 226 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 METTL26Q96S19 204 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 CITED1Q99966 193 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 LENEPQ9Y5L5 61 aa3.72□□□□□ -1.81
LINC00458-202ENST00000427299 MUC3AQ02505 3323 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 IGKV2-40A0A087WW87 121 aaPredicted RBP3.71□□□□□ -1.82
LINC00458-202ENST00000427299 A0A096LNJ9 63 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 TRBV7-1A0A0A6YYK4 115 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 NCBP2LA6PVI3 153 aaKnown RBP3.71□□□□□ -1.82
LINC00458-202ENST00000427299 M0R3E3 92 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 SOCS3O14543 225 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 DPM2O94777 84 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 PPP1R17O96001 155 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 NPYP01303 97 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 IGKV2D-40P01614 121 aaPredicted RBP3.71□□□□□ -1.82
LINC00458-202ENST00000427299 IGKCP01834 107 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 FGF6P10767 208 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 FCER1GP30273 86 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 NMUP48645 174 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 EBI3Q14213 229 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 KLK9Q2XQG4 91 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 VMO1Q7Z5L0 202 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 Q8N6K4 173 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 Q8N8P6 123 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 MRAP2Q96G30 205 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 KLK9Q9UKQ9 250 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 PIEZO2Q9H5I5 2752 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 DSPP15924 2871 aaKnown RBP3.71□□□□□ -1.82
LINC00458-202ENST00000427299 CEP250Q9BV73 2442 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 BDP1A6H8Y1 2624 aa3.71□□□□□ -1.82
LINC00458-202ENST00000427299 LOC400499M0QZD8 3231 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 APC2O95996 2303 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 IGHV4-30-2A0A087WSY4 118 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 TMSB15BA0A087X1C1 80 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 A0A0G2JLM5 398 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 LOC389332A0A1B0GUA5 103 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 FAM223BA6NKX1 122 aa3.7□□□□□ -1.82
LINC00458-202ENST00000427299 LINC01619G3V211 115 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms