RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HIST1H2BBP33778 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST1H2BDP58876 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST1H2BCP62807 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 SLAQ13239 276 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST2H2BEQ16778 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST1H2BHQ93079 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST1H2BNQ99877 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 HIST1H2BMQ99879 126 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 SCRT2Q9NQ03 307 aa11.04□□□□□ -0.64
GINS3-203ENST00000426538 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 M0R381 172 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 KIAA1644Q3SXP7 199 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 GOLT1BQ9Y3E0 138 aa11.03□□□□□ -0.64
GINS3-203ENST00000426538 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
GINS3-203ENST00000426538 LURAP1LQ8IV03 231 aa11.02□□□□□ -0.65
GINS3-203ENST00000426538 C1orf158Q8N1D5 194 aa11.02□□□□□ -0.65
GINS3-203ENST00000426538 GATD1Q8NB37 220 aa11.02□□□□□ -0.65
GINS3-203ENST00000426538 GIG44P09565 113 aaPredicted RBP11.01□□□□□ -0.65
GINS3-203ENST00000426538 TMEM191AQ9H0A3 160 aa11.01□□□□□ -0.65
GINS3-203ENST00000426538 SPRY2O43597 315 aa11.01□□□□□ -0.65
GINS3-203ENST00000426538 EGFEM1PQ0D2K5 195 aa11.01□□□□□ -0.65
GINS3-203ENST00000426538 C9orf85Q96MD7 179 aa11.01□□□□□ -0.65
GINS3-203ENST00000426538 ZNF415Q09FC8 603 aa11□□□□□ -0.65
GINS3-203ENST00000426538 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
GINS3-203ENST00000426538 FAM104BQ5XKR9 115 aa11□□□□□ -0.65
GINS3-203ENST00000426538 SYT8Q8NBV8 401 aa11□□□□□ -0.65
GINS3-203ENST00000426538 PRM2P04554 102 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 APOC4P55056 127 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 NDUFA6P56556 154 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 KRTAP10-11P60412 298 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 CSNK1G2-AS1Q8NCQ2 148 aa10.99□□□□□ -0.65
GINS3-203ENST00000426538 KIR2DL5BA0A0G2JN68 375 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 KIR2DL5BA0A0G2JPC4 375 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 G3V4G9 280 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 EVI2AP22794 236 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 SRIP30626 198 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 KIR2DL5BQ8NHK3 375 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 GSN-AS1Q9NRJ2 163 aa10.98□□□□□ -0.65
GINS3-203ENST00000426538 NXPH4O95158 308 aa10.97□□□□□ -0.65
GINS3-203ENST00000426538 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
GINS3-203ENST00000426538 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
GINS3-203ENST00000426538 AP1S3Q96PC3 154 aa10.97□□□□□ -0.65
GINS3-203ENST00000426538 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
GINS3-203ENST00000426538 AZU1P20160 251 aa10.96□□□□□ -0.65
GINS3-203ENST00000426538 RAB4AP20338 218 aa10.96□□□□□ -0.65
GINS3-203ENST00000426538 SNRPEP62304 92 aaKnown RBP10.96□□□□□ -0.65
GINS3-203ENST00000426538 ZNF705AQ6ZN79 300 aaPredicted RBP10.96□□□□□ -0.65
GINS3-203ENST00000426538 ALKBH7Q9BT30 221 aaPredicted RBP10.96□□□□□ -0.65
GINS3-203ENST00000426538 SPXQ9BT56 116 aa10.96□□□□□ -0.65
GINS3-203ENST00000426538 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
GINS3-203ENST00000426538 SAMD5Q5TGI4 173 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 C14orf178Q8N769 122 aaPredicted RBP10.95□□□□□ -0.66
GINS3-203ENST00000426538 C11orf72Q8NBR9 251 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 TMEM263Q8WUH6 116 aaKnown RBP10.95□□□□□ -0.66
GINS3-203ENST00000426538 DPH3P1Q9H4G8 78 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 MUC4Q99102 2169 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 PKD1L1Q8TDX9 2849 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 M0R2P5 195 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 CKS2P33552 79 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 OR10J3Q5JRS4 329 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 ORMDL3Q8N138 153 aa10.95□□□□□ -0.66
GINS3-203ENST00000426538 ANK2Q01484 3957 aa10.94□□□□□ -0.66
GINS3-203ENST00000426538 UBE2CO00762 179 aa10.94□□□□□ -0.66
GINS3-203ENST00000426538 Q0VG73 95 aa10.94□□□□□ -0.66
GINS3-203ENST00000426538 RNASE8Q8TDE3 154 aaKnown RBP10.94□□□□□ -0.66
GINS3-203ENST00000426538 RNF185Q96GF1 192 aa10.94□□□□□ -0.66
GINS3-203ENST00000426538 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
GINS3-203ENST00000426538 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
GINS3-203ENST00000426538 C5orf52A6NGY3 159 aa10.93□□□□□ -0.66
GINS3-203ENST00000426538 D6R8Y8 96 aa10.93□□□□□ -0.66
GINS3-203ENST00000426538 PPBPP02775 128 aa10.93□□□□□ -0.66
GINS3-203ENST00000426538 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
GINS3-203ENST00000426538 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 PTH2Q96A98 100 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 PRELID3AQ96N28 172 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 JPT2Q9H910 190 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 MGPP08493 103 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 C18orf32Q8TCD1 76 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 U3KQK5 164 aa10.92□□□□□ -0.66
GINS3-203ENST00000426538 A0A087WWL8 130 aa10.91□□□□□ -0.66
GINS3-203ENST00000426538 A8MZ25 164 aa10.91□□□□□ -0.66
GINS3-203ENST00000426538 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
GINS3-203ENST00000426538 COA6Q5JTJ3 125 aaKnown RBP10.91□□□□□ -0.66
GINS3-203ENST00000426538 FAM74A4Q5TZK3 123 aa10.91□□□□□ -0.66
GINS3-203ENST00000426538 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
GINS3-203ENST00000426538 A8MWV9 139 aa10.9□□□□□ -0.66
GINS3-203ENST00000426538 SMKR1H3BMG3 65 aa10.9□□□□□ -0.66
GINS3-203ENST00000426538 HOXA5P20719 270 aa10.9□□□□□ -0.66
GINS3-203ENST00000426538 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
GINS3-203ENST00000426538 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms