RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
SREBF2-202ENST00000424354 IGHV3-38A0A0C4DH36 116 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 IGF2BP2-AS1Q96M15 143 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 TRAV12-2A0A075B6T6 113 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 H3BUA1 57 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 DYNAPQ8N1N2 210 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 Q71RC1 249 aaPredicted RBP10.87□□□□□ -0.67
SREBF2-202ENST00000424354 CFHR4Q92496 578 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
SREBF2-202ENST00000424354 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
SREBF2-202ENST00000424354 BAALC-AS2P0C853 105 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 HERV-K104P63124 156 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 Q6ZSR3 168 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 C17orf77Q96MU5 243 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 TCTEX1D4Q5JR98 221 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 MRAPQ8TCY5 172 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 PSCAO43653 123 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 NXPH4O95158 308 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 HOXD3P31249 432 aaPredicted RBP10.86□□□□□ -0.67
SREBF2-202ENST00000424354 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 SH2D6Q7Z4S9 175 aa10.86□□□□□ -0.67
SREBF2-202ENST00000424354 DIAPH2-AS1Q14236 149 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 ATG2AQ2TAZ0 1938 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 GP9P14770 177 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
SREBF2-202ENST00000424354 TEN1Q86WV5 123 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 SPRY4Q9C004 299 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 ORMDL1Q9P0S3 153 aa10.85□□□□□ -0.67
SREBF2-202ENST00000424354 TINCRA0A1B0GVN0 87 aa10.84□□□□□ -0.67
SREBF2-202ENST00000424354 ZNF106Q9H2Y7 1883 aaKnown RBP10.84□□□□□ -0.67
SREBF2-202ENST00000424354 TRAV25A0A0B4J276 109 aa10.84□□□□□ -0.67
SREBF2-202ENST00000424354 DAD1P61803 113 aa10.84□□□□□ -0.67
SREBF2-202ENST00000424354 CFHR3Q02985 330 aa10.84□□□□□ -0.67
SREBF2-202ENST00000424354 UNC80Q8N2C7 3258 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 TAX1BP3O14907 124 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 ATRXP46100 2492 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 PRUNE2Q8WUY3 3088 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 TRAV12-1A0A0B4J245 112 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 RBM3P98179 157 aaKnown RBP10.83□□□□□ -0.68
SREBF2-202ENST00000424354 LYPD6Q86Y78 171 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 SLC25A29Q8N8R3 303 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 KMT2EQ8IZD2 1858 aa10.83□□□□□ -0.68
SREBF2-202ENST00000424354 FOXE3Q13461 319 aa10.82□□□□□ -0.68
SREBF2-202ENST00000424354 KRTAP27-1Q3LI81 207 aa10.82□□□□□ -0.68
SREBF2-202ENST00000424354 CR1LQ2VPA4 569 aa10.82□□□□□ -0.68
SREBF2-202ENST00000424354 Q9H8V8 135 aa10.82□□□□□ -0.68
SREBF2-202ENST00000424354 C11orf53Q8IXP5 236 aa10.82□□□□□ -0.68
SREBF2-202ENST00000424354 PTPRQQ9UMZ3 2332 aa10.81□□□□□ -0.68
SREBF2-202ENST00000424354 F5H768 121 aa10.81□□□□□ -0.68
SREBF2-202ENST00000424354 ATOX1O00244 68 aa10.81□□□□□ -0.68
SREBF2-202ENST00000424354 GNRH2O43555 120 aa10.81□□□□□ -0.68
SREBF2-202ENST00000424354 YLPM1P49750 1951 aaKnown RBP10.81□□□□□ -0.68
SREBF2-202ENST00000424354 A0A0B4J2C4 111 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
SREBF2-202ENST00000424354 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
SREBF2-202ENST00000424354 H0YGX0 51 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 PCNX3Q9H6A9 2034 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 ELANEP08246 267 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 FXYD2P54710 66 aa10.8□□□□□ -0.68
SREBF2-202ENST00000424354 NCOA6Q14686 2063 aaPredicted RBP10.79□□□□□ -0.68
SREBF2-202ENST00000424354 LINC01620Q4KN68 170 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 ATP6V0E2Q8NHE4 81 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 J3QLI3 93 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 G3V4G9 280 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 I3L2K1 104 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 FOXI1Q12951 378 aa10.79□□□□□ -0.68
SREBF2-202ENST00000424354 ANKHD1Q8IWZ3 2542 aaKnown RBP10.79□□□□□ -0.68
SREBF2-202ENST00000424354 A4D1N5 150 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 CRYGCP07315 174 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 WFDC2Q14508 124 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 PATE2Q6UY27 113 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 MUSTN1Q8IVN3 82 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 FGF23Q9GZV9 251 aaPredicted RBP10.78□□□□□ -0.68
SREBF2-202ENST00000424354 ZFP2Q6ZN57 461 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 CHD9Q3L8U1 2897 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 CEP192Q8TEP8 1941 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 SPTBN4Q9H254 2564 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 GTSF1Q8WW33 167 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 SMIM20Q8N5G0 67 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 FAM167A-AS1Q96KT0 104 aa10.78□□□□□ -0.68
SREBF2-202ENST00000424354 LHBP01229 141 aa10.77□□□□□ -0.69
SREBF2-202ENST00000424354 RNF138Q8WVD3 245 aa10.77□□□□□ -0.69
SREBF2-202ENST00000424354 RPL39LQ96EH5 51 aaKnown RBP10.77□□□□□ -0.69
SREBF2-202ENST00000424354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.69
SREBF2-202ENST00000424354 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
SREBF2-202ENST00000424354 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.69
SREBF2-202ENST00000424354 NPBQ8NG41 125 aa10.77□□□□□ -0.69
SREBF2-202ENST00000424354 J3KT08 172 aa10.76□□□□□ -0.69
SREBF2-202ENST00000424354 APOC4P55056 127 aa10.76□□□□□ -0.69
SREBF2-202ENST00000424354 IGFBPL1Q8WX77 278 aa10.76□□□□□ -0.69
SREBF2-202ENST00000424354 RNF152Q8N8N0 203 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms