RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 P0DMU3 169 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 FAM231AP0DMU4 169 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 FAM231CP0DMU5 169 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 SLAQ13239 276 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 PCNPQ8WW12 178 aaKnown RBP12.87□□□□□ -0.35
HDAC6-205ENST00000423941 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-205ENST00000423941 EIF5A2Q9GZV4 153 aaKnown RBP12.87□□□□□ -0.35
HDAC6-205ENST00000423941 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 VPS13DQ5THJ4 4388 aa12.87□□□□□ -0.35
HDAC6-205ENST00000423941 GRIFINA4D1Z8 144 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 RS1O15537 224 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 CIDEAO60543 219 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
HDAC6-205ENST00000423941 SFTA3P0C7M3 94 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 MED14OSP0DP75 135 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
HDAC6-205ENST00000423941 OCC1Q8TAD7 63 aa12.86□□□□□ -0.35
HDAC6-205ENST00000423941 HYDINQ4G0P3 5121 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 CRYBA4P53673 196 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 RPL19P84098 196 aaKnown RBP12.85□□□□□ -0.35
HDAC6-205ENST00000423941 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 PRR27Q6MZM9 219 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 BIN3Q9NQY0 253 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
HDAC6-205ENST00000423941 H3BVH4 76 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 SNAI2O43623 268 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 MGST1P10620 155 aaKnown RBP12.84□□□□□ -0.35
HDAC6-205ENST00000423941 RNF212Q495C1 297 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 OR4C5Q8NGB2 326 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 LY96Q9Y6Y9 160 aa12.84□□□□□ -0.35
HDAC6-205ENST00000423941 TMSB15BA0A087X1C1 80 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 A0A0J9YY99 117 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 K7EN84 100 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 OR5AL1P0C617 328 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 IFITM2Q01629 132 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 SMDT1Q9H4I9 107 aa12.83□□□□□ -0.36
HDAC6-205ENST00000423941 A0A096LPF7 62 aa12.82□□□□□ -0.36
HDAC6-205ENST00000423941 C9JQL5 133 aa12.82□□□□□ -0.36
HDAC6-205ENST00000423941 NXPH4O95158 308 aa12.82□□□□□ -0.36
HDAC6-205ENST00000423941 GATA1P15976 413 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-205ENST00000423941 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
HDAC6-205ENST00000423941 TRGV4A0A0C4DH28 118 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 A8MWV9 139 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 PAX4O43316 350 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 NUDT3O95989 172 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
HDAC6-205ENST00000423941 ZFP2Q6ZN57 461 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 NUDT10Q8NFP7 164 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 DAZAP1Q96EP5 407 aaKnown RBP12.81□□□□□ -0.36
HDAC6-205ENST00000423941 NUDT11Q96G61 164 aa12.81□□□□□ -0.36
HDAC6-205ENST00000423941 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
HDAC6-205ENST00000423941 RPS20P60866 119 aaKnown RBP12.8□□□□□ -0.36
HDAC6-205ENST00000423941 PHLDA3Q9Y5J5 127 aa12.8□□□□□ -0.36
HDAC6-205ENST00000423941 P01737 135 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 FAM3BP58499 235 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-205ENST00000423941 PEA15Q15121 130 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 FAM231DQ6ZW35 169 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 SYT8Q8NBV8 401 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 OR2D3Q8NGH3 330 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 SFRP2Q96HF1 295 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 SMIM7Q9BQ49 75 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 JPT2Q9H910 190 aa12.79□□□□□ -0.36
HDAC6-205ENST00000423941 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
HDAC6-205ENST00000423941 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
HDAC6-205ENST00000423941 SAMD10Q9BYL1 202 aa12.78□□□□□ -0.36
HDAC6-205ENST00000423941 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 CRYGDP07320 174 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 ESRGQ1W209 222 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 FAM74A3Q4VXF1 159 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 CLLU1Q5K131 121 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 OR10AG1Q8NH19 301 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 LINC00588Q9Y4M8 146 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 ICOSQ9Y6W8 199 aa12.77□□□□□ -0.37
HDAC6-205ENST00000423941 KMT2AQ03164 3969 aa12.76□□□□□ -0.37
HDAC6-205ENST00000423941 GZMBP10144 247 aa12.76□□□□□ -0.37
HDAC6-205ENST00000423941 CEBPGP53567 150 aa12.76□□□□□ -0.37
HDAC6-205ENST00000423941 MRPL23Q16540 153 aaKnown RBP12.76□□□□□ -0.37
HDAC6-205ENST00000423941 Q6ZSN1 163 aa12.76□□□□□ -0.37
HDAC6-205ENST00000423941 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
HDAC6-205ENST00000423941 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
HDAC6-205ENST00000423941 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
HDAC6-205ENST00000423941 K7EQD1 137 aa12.75□□□□□ -0.37
HDAC6-205ENST00000423941 M0R381 172 aa12.75□□□□□ -0.37
HDAC6-205ENST00000423941 CCL18P55774 89 aa12.75□□□□□ -0.37
HDAC6-205ENST00000423941 RAB14P61106 215 aa12.75□□□□□ -0.37
HDAC6-205ENST00000423941 RPP21Q9H633 154 aaKnown RBP12.75□□□□□ -0.37
HDAC6-205ENST00000423941 F2Z2F3 143 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 RHODO00212 210 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 GYPEP15421 78 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 UPK3BQ9BT76 320 aa12.74□□□□□ -0.37
HDAC6-205ENST00000423941 IGHV3-73A0A0B4J1V6 119 aa12.73□□□□□ -0.37
HDAC6-205ENST00000423941 TMEM241Q24JQ0 296 aa12.73□□□□□ -0.37
HDAC6-205ENST00000423941 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms