RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 SPTBN1Q01082 2364 aaKnown RBP12.56□□□□□ -0.4
LIMS2-208ENST00000410011 F8W1H4 67 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 LINC00315P59091 139 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 HIST1H4GQ99525 98 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 HIVEP3Q5T1R4 2406 aa12.56□□□□□ -0.4
LIMS2-208ENST00000410011 IGHV4-61A0A0C4DH41 118 aa12.55□□□□□ -0.4
LIMS2-208ENST00000410011 GNRH2O43555 120 aa12.55□□□□□ -0.4
LIMS2-208ENST00000410011 C10orf105Q8TEF2 133 aa12.55□□□□□ -0.4
LIMS2-208ENST00000410011 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
LIMS2-208ENST00000410011 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
LIMS2-208ENST00000410011 CFHR3Q02985 330 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 ZNF479Q96JC4 524 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 PF4V1P10720 104 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 PAPPA-AS1Q5QFB9 102 aa12.54□□□□□ -0.4
LIMS2-208ENST00000410011 ATRXP46100 2492 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 IGF2RP11717 2491 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 F6UB75 175 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 H3BUX3 64 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 MGPP08493 103 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 ID1P41134 155 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 POLR2KP53803 58 aaKnown RBP12.53□□□□□ -0.4
LIMS2-208ENST00000410011 DEFB1P60022 68 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 LY6DQ14210 128 aa12.53□□□□□ -0.4
LIMS2-208ENST00000410011 LGALS1P09382 135 aaKnown RBP12.52□□□□□ -0.41
LIMS2-208ENST00000410011 LY6EQ16553 131 aa12.52□□□□□ -0.41
LIMS2-208ENST00000410011 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
LIMS2-208ENST00000410011 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
LIMS2-208ENST00000410011 PRORYQ9H606 182 aa12.52□□□□□ -0.41
LIMS2-208ENST00000410011 CYSLTR1Q9Y271 337 aa12.52□□□□□ -0.41
LIMS2-208ENST00000410011 SPRY2O43597 315 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 BLCAPP62952 87 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 DCANP1Q8TF63 244 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 SELENOKQ9Y6D0 94 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 COL6A6A6NMZ7 2263 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 COX6B1P14854 86 aa12.51□□□□□ -0.41
LIMS2-208ENST00000410011 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 VCYO14598 125 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 CRYGDP07320 174 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 PRADC1Q9BSG0 188 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 ABCA2Q9BZC7 2435 aa12.5□□□□□ -0.41
LIMS2-208ENST00000410011 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
LIMS2-208ENST00000410011 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
LIMS2-208ENST00000410011 AGRNO00468 2067 aa12.49□□□□□ -0.41
LIMS2-208ENST00000410011 SVEP1Q4LDE5 3571 aa12.49□□□□□ -0.41
LIMS2-208ENST00000410011 LGALS9O00182 355 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
LIMS2-208ENST00000410011 TSHBP01222 138 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 RIPPLY3P57055 190 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 Q6ZS46 218 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 LCNL1Q6ZST4 164 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 TEX48A0A1B0GUV7 120 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 TMEM238LA0A1B0GVL6 79 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 A6NJY4 79 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 DUSP14O95147 198 aaKnown RBP12.48□□□□□ -0.41
LIMS2-208ENST00000410011 MSMBP08118 114 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 GNLYP22749 145 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 PMVKQ15126 192 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 KIR2DL4Q99706 377 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 CCL19Q99731 98 aa12.48□□□□□ -0.41
LIMS2-208ENST00000410011 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
LIMS2-208ENST00000410011 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
LIMS2-208ENST00000410011 RPL24P83731 157 aaKnown RBP12.47□□□□□ -0.41
LIMS2-208ENST00000410011 SUMO4Q6EEV6 95 aa12.47□□□□□ -0.41
LIMS2-208ENST00000410011 MUC4Q99102 2169 aa12.47□□□□□ -0.41
LIMS2-208ENST00000410011 ASH1LQ9NR48 2969 aaKnown RBP12.47□□□□□ -0.41
LIMS2-208ENST00000410011 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.41
LIMS2-208ENST00000410011 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 PSMB8P28062 276 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 HERVK_113P61574 105 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
LIMS2-208ENST00000410011 J3QR89 54 aa12.45□□□□□ -0.42
LIMS2-208ENST00000410011 UBE2D1P51668 147 aa12.45□□□□□ -0.42
LIMS2-208ENST00000410011 SCGB2A2Q13296 93 aa12.45□□□□□ -0.42
LIMS2-208ENST00000410011 MORN3Q6PF18 240 aaPredicted RBP12.45□□□□□ -0.42
LIMS2-208ENST00000410011 GATA3P23771 443 aa12.45□□□□□ -0.42
LIMS2-208ENST00000410011 H3BMG7 143 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 CD7P09564 240 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 WFDC2Q14508 124 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 RNF152Q8N8N0 203 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 PRO0461Q9UI25 63 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 IGHV4-30-2A0A087WSY4 118 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
LIMS2-208ENST00000410011 IGHV3-16A0A0C4DH30 117 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 SDHAF1A6NFY7 115 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 SCGB1D4Q6XE38 83 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 B4DSR2 109 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 SRD5A1P18405 259 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 ATP5J2P56134 94 aa12.43□□□□□ -0.42
LIMS2-208ENST00000410011 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms