RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 OR10J3Q5JRS4 329 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 LELP1Q5T871 98 aa9.78□□□□□ -0.84
MCF2L-210ENST00000409954 A8MWV9 139 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 GGTLC3B5MD39 225 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 IFNA7P01567 189 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
MCF2L-210ENST00000409954 DPPA3Q6W0C5 159 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 ZFP2Q6ZN57 461 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 ATP6V0E2Q8NHE4 81 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 GTSF1LQ9H1H1 148 aa9.77□□□□□ -0.85
MCF2L-210ENST00000409954 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
MCF2L-210ENST00000409954 Q5BKY6 102 aa9.76□□□□□ -0.85
MCF2L-210ENST00000409954 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
MCF2L-210ENST00000409954 NTN5Q8WTR8 489 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-210ENST00000409954 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
MCF2L-210ENST00000409954 CTXND1A0A1B0GTU2 59 aa9.75□□□□□ -0.85
MCF2L-210ENST00000409954 FUSP35637 526 aaKnown RBP eCLIP9.75□□□□□ -0.859e-6■■■□□ 18.4
MCF2L-210ENST00000409954 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
MCF2L-210ENST00000409954 RPL7L1Q6DKI1 246 aaKnown RBP9.75□□□□□ -0.85
MCF2L-210ENST00000409954 HIST1H2BAQ96A08 127 aa9.75□□□□□ -0.85
MCF2L-210ENST00000409954 TM2D2Q9BX73 214 aa9.75□□□□□ -0.85
MCF2L-210ENST00000409954 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
MCF2L-210ENST00000409954 IGKV3D-20A0A0C4DH25 116 aa9.74□□□□□ -0.85
MCF2L-210ENST00000409954 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-210ENST00000409954 LGALSLQ3ZCW2 172 aaPredicted RBP9.74□□□□□ -0.85
MCF2L-210ENST00000409954 FRZBQ92765 325 aa9.74□□□□□ -0.85
MCF2L-210ENST00000409954 LINC00479Q96M42 142 aa9.74□□□□□ -0.85
MCF2L-210ENST00000409954 IL36BQ9NZH7 164 aa9.74□□□□□ -0.85
MCF2L-210ENST00000409954 ZFP30Q9Y2G7 519 aa9.74□□□□□ -0.85
MCF2L-210ENST00000409954 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 ASIPP42127 132 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 LAGE3Q14657 143 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 AKR1C8PQ5T2L2 129 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 ARL2-SNX15V9GYD0 113 aa9.73□□□□□ -0.85
MCF2L-210ENST00000409954 A0A087WWC5 75 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 FXYD6-FXYD2A0A087WZ82 144 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 IGLV5-52A0A0A0MRZ9 124 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 RNF222A6NCQ9 220 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 PEX7O00628 323 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 OR2T35Q8NGX2 323 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 PARLQ9H300 379 aa9.72□□□□□ -0.85
MCF2L-210ENST00000409954 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 FAM74A7A6NL05 159 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 B4DEV8 164 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 TOR2AQ5JU69 321 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 Q6ZSN1 163 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 STOML3Q8TAV4 291 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.86
MCF2L-210ENST00000409954 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 UBE2G2P60604 165 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 Q8N814 137 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 Q9HAA7 133 aa9.7□□□□□ -0.86
MCF2L-210ENST00000409954 GAGE12JA6NER3 117 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 RHODO00212 210 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 ARMS2P0C7Q2 107 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 SEC11BP0C7V7 166 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 FHITP49789 147 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 CRIP1P50238 77 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 GAGE1Q13065 139 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 GAGE4Q13068 117 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 GAGE5Q13069 117 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 GAGE13Q4V321 117 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 FMC1Q96HJ9 113 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 COX11Q9Y6N1 276 aa9.69□□□□□ -0.86
MCF2L-210ENST00000409954 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
MCF2L-210ENST00000409954 C1QBP02746 253 aa9.68□□□□□ -0.86
MCF2L-210ENST00000409954 UBE2G1P62253 170 aa9.68□□□□□ -0.86
MCF2L-210ENST00000409954 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
MCF2L-210ENST00000409954 TPT1P13693 172 aaKnown RBP9.67□□□□□ -0.86
MCF2L-210ENST00000409954 ZNF674Q2M3X9 581 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 Q5VSD8 79 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 Q86TA4 180 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 OR11H4Q8NGC9 324 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 ZC2HC1AQ96GY0 325 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 JPT2Q9H910 190 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
MCF2L-210ENST00000409954 MAP1LC3B2A6NCE7 125 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 SH2D1AO60880 128 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 SMR3BP02814 79 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-210ENST00000409954 S100A9P06702 114 aaKnown RBP9.66□□□□□ -0.86
MCF2L-210ENST00000409954 LINC00694P0DN24 101 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 CST9LP1Q5W188 147 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 SAMD10Q9BYL1 202 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 MAP1LC3BQ9GZQ8 125 aa9.66□□□□□ -0.86
MCF2L-210ENST00000409954 CYTL1Q9NRR1 136 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms