RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZNF345Q14585 488 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 C9orf85Q96MD7 179 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 PRADC1Q9BSG0 188 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 ARL2-SNX15V9GYD0 113 aa9.94□□□□□ -0.82
NIF3L1-205ENST00000409588 FAM74A7A6NL05 159 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 HMSDA8MTL9 139 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 UMAD1C9J7I0 102 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 G3V3Q6 166 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 EREGO14944 169 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 RS1O15537 224 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 ZNF726P1Q15940 193 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 CYTL1Q9NRR1 136 aa9.93□□□□□ -0.82
NIF3L1-205ENST00000409588 A0A0D9SG52 128 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 PEX7O00628 323 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 SEC11BP0C7V7 166 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 DNAH10OSP0CZ25 163 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 MGST1P10620 155 aaKnown RBP9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 LINC00315P59091 139 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 CFAP126Q5VTH2 177 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 ZFP2Q6ZN57 461 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 ZNF575Q86XF7 245 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 KCNRGQ8N5I3 272 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 C11orf21Q9P2W6 132 aa9.92□□□□□ -0.82
NIF3L1-205ENST00000409588 DNAH11Q96DT5 4516 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 TRBV6-1A0A0K0K1D8 114 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 MAP1LC3B2A6NCE7 125 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 A8MWV9 139 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 S100A9P06702 114 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 S100A4P26447 101 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 EIF5AP63241 154 aaKnown RBP9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 RHOHQ15669 191 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 LINC00479Q96M42 142 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 MAP1LC3BQ9GZQ8 125 aa9.91□□□□□ -0.82
NIF3L1-205ENST00000409588 RNASE3P12724 160 aaKnown RBP9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 UBE2G2P60604 165 aa9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 DPPA3Q6W0C5 159 aa9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 Q6ZRN7 208 aaPredicted RBP9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 SLC25A29Q8N8R3 303 aa9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
NIF3L1-205ENST00000409588 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 ASIPP42127 132 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 UBE2G1P62253 170 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 LGALSLQ3ZCW2 172 aaPredicted RBP9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 MBD3L1Q8WWY6 194 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
NIF3L1-205ENST00000409588 PGPEP1LA6NFU8 196 aa9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 FGF8P55075 233 aaPredicted RBP9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 ERVFC1-1P60608 527 aa9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 ZNF506Q5JVG8 444 aa9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 FAM162BQ5T6X4 162 aa9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 DYNC1H1Q14204 4646 aaKnown RBP9.88□□□□□ -0.83
NIF3L1-205ENST00000409588 IGHV3-38A0A0C4DH36 116 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 KANTRA0A1W2PQU2 76 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 B4DEV8 164 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 Q86TA4 180 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 SYT8Q8NBV8 401 aa9.87□□□□□ -0.83
NIF3L1-205ENST00000409588 KRBOX1C9JBD0 128 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 LTAP01374 205 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 CRYGDP07320 174 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 ZNF674Q2M3X9 581 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 GTSF1LQ9H1H1 148 aa9.86□□□□□ -0.83
NIF3L1-205ENST00000409588 RHODO00212 210 aa9.85□□□□□ -0.83
NIF3L1-205ENST00000409588 BCL2L11O43521 198 aa9.85□□□□□ -0.83
NIF3L1-205ENST00000409588 CRIP1P50238 77 aa9.85□□□□□ -0.83
NIF3L1-205ENST00000409588 LELP1Q5T871 98 aa9.85□□□□□ -0.83
NIF3L1-205ENST00000409588 ATP6V0E2Q8NHE4 81 aa9.85□□□□□ -0.83
NIF3L1-205ENST00000409588 A0A087WWC5 75 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 LOC100131303A0A0U1RQF7 123 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 OR10J3Q5JRS4 329 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 EIF5AL1Q6IS14 154 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 ZC2HC1AQ96GY0 325 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 ZNF471Q9BX82 626 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 KRTAP17-1Q9BYP8 105 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 PARLQ9H300 379 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
NIF3L1-205ENST00000409588 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 SMLR1H3BR10 107 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 PAGE4O60829 102 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 SH2D1AO60880 128 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 PFDN1O60925 122 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 ARMS2P0C7Q2 107 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 TPT1P13693 172 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 AKR1C3P42330 323 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 RAB5CP51148 216 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 KRTAP10-2P60368 255 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 OR11H4Q8NGC9 324 aa9.83□□□□□ -0.84
NIF3L1-205ENST00000409588 FAM213BQ8TBF2 198 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms