RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DSCAMO60469 2012 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 COX8AP10176 69 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 DEFB136Q30KP8 78 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 PATE2Q6UY27 113 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 C9orf47Q6ZRZ4 202 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 SCGB1A1P11684 91 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 PTPN13Q12923 2485 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 ZNF561-AS1K7EIQ3 104 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 KMT2EQ8IZD2 1858 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 LEPROTO15243 131 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 PAX2Q02962 417 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9O00182 355 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 U3KQE9 123 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 CFHR4Q92496 578 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 ATP5G1P05496 136 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 CST9LQ9H4G1 147 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 NAV2Q8IVL1 2488 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 FAM167A-AS1Q96KT0 104 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 ESDP10768 282 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 NPYP01303 97 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 MRPL23Q16540 153 aaKnown RBP12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 MORN5Q5VZ52 161 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 IGHV3-16A0A0C4DH30 117 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HERVK_113P63121 156 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 CFHR3Q02985 330 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 OCIAD2Q56VL3 154 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 NAV3Q8IVL0 2385 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 TSPAN13O95857 204 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 C9orf118A6NHY6 69 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 F6UB75 175 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 IGF2RP11717 2491 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ARHGAP21Q5T5U3 1957 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ZNF295-AS1Q8N0V1 137 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 CITED2Q99967 270 aaPredicted RBP12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 PROP1O75360 226 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 BVES-AS1Q5T3Y7 98 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 ODF3Q96PU9 254 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 SPANXA1Q9NS26 97 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 IGKV1OR2-108A0A075B7D4 117 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 MBD6Q96DN6 1003 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 C10orf126Q8N4M7 172 aa12.92□□□□□ -0.34
PCDHA13-202ENST00000409494 F8VRH5 84 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 CRYGBP07316 175 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 PLA2G2AP14555 144 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ4Q86SG3 579 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ3Q9NR90 486 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 GNRH2O43555 120 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 ADAMTSL5Q6ZMM2 481 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 GAGE6Q13070 117 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 APRG1Q8IVJ8 170 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 EIF4EBP1Q13541 118 aaPredicted RBP12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 BRWD1-AS2P59051 145 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 E7EUB6 86 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 CCL18P55774 89 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 A0A0J9YX75 114 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 SIVA1O15304 175 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 K7EP34 96 aa12.87□□□□□ -0.35
PCDHA13-202ENST00000409494 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 K7EP13 123 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms