RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 RS1O15537 224 aa12.4□□□□□ -0.42
PDLIM2-206ENST00000409141 RPL35P42766 123 aaKnown RBP12.4□□□□□ -0.42
PDLIM2-206ENST00000409141 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
PDLIM2-206ENST00000409141 ALKAL2Q6UX46 152 aa12.4□□□□□ -0.42
PDLIM2-206ENST00000409141 Q9H8V8 135 aa12.4□□□□□ -0.42
PDLIM2-206ENST00000409141 TMSB15BA0A087X1C1 80 aa12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 LINC01559Q495D7 138 aa12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 C11orf52Q96A22 123 aa12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 MLST8Q9BVC4 326 aa12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 IL36BQ9NZH7 164 aa12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.43
PDLIM2-206ENST00000409141 NBDYA0A0U1RRE5 68 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 H3BVH4 76 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 CIDEAO60543 219 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 GYPEP15421 78 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 NEGR1Q7Z3B1 354 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 DERL1Q9BUN8 251 aa12.39□□□□□ -0.43
PDLIM2-206ENST00000409141 IGHV3-73A0A0B4J1V6 119 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 K7EQD1 137 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 PDE6DO43924 150 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 ARMS2P0C7Q2 107 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 BCL2P10415 239 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 SRIP30626 198 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 BLOC1S1P78537 153 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 UPK3BQ9BT76 320 aa12.38□□□□□ -0.43
PDLIM2-206ENST00000409141 GATA1P15976 413 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 PRR27Q6MZM9 219 aa12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 ZNF575Q86XF7 245 aa12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
PDLIM2-206ENST00000409141 RTL8CO15255 209 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 SOHLH1Q5JUK2 328 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 PIK3CD-AS1Q5SR53 167 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 C1orf134Q5TEV5 83 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 LYPD5Q6UWN5 251 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 MED9Q9NWA0 146 aa12.36□□□□□ -0.43
PDLIM2-206ENST00000409141 A8MWV9 139 aa12.35□□□□□ -0.43
PDLIM2-206ENST00000409141 TAGLN2P37802 199 aaKnown RBP12.35□□□□□ -0.43
PDLIM2-206ENST00000409141 DMRTA1Q5VZB9 504 aa12.35□□□□□ -0.43
PDLIM2-206ENST00000409141 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
PDLIM2-206ENST00000409141 PHLDA3Q9Y5J5 127 aa12.35□□□□□ -0.43
PDLIM2-206ENST00000409141 LOC100131303A0A0U1RQF7 123 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 RAB19A4D1S5 217 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 CENPWQ5EE01 88 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 FRAS1Q86XX4 4008 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 GNG4P50150 75 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 RPL19P84098 196 aaKnown RBP12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 PRADC1Q9BSG0 188 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 PARLQ9H300 379 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 JPT2Q9H910 190 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 SCRT2Q9NQ03 307 aa12.34□□□□□ -0.43
PDLIM2-206ENST00000409141 PRSS29PA6NIE9 313 aa12.33□□□□□ -0.44
PDLIM2-206ENST00000409141 NXPH4O95158 308 aa12.33□□□□□ -0.44
PDLIM2-206ENST00000409141 MGST1P10620 155 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-206ENST00000409141 TTC32Q5I0X7 151 aa12.33□□□□□ -0.44
PDLIM2-206ENST00000409141 ZFP2Q6ZN57 461 aa12.33□□□□□ -0.44
PDLIM2-206ENST00000409141 BIRC6Q9NR09 4857 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 M0R381 172 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 SIVA1O15304 175 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 IGLV2-8P01709 118 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 RHOHQ15669 191 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 SH2D6Q7Z4S9 175 aa12.32□□□□□ -0.44
PDLIM2-206ENST00000409141 Q6ZSN1 163 aa12.31□□□□□ -0.44
PDLIM2-206ENST00000409141 ZFP82Q8N141 532 aa12.31□□□□□ -0.44
PDLIM2-206ENST00000409141 C6orf223Q8N319 242 aa12.31□□□□□ -0.44
PDLIM2-206ENST00000409141 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
PDLIM2-206ENST00000409141 SAMD10Q9BYL1 202 aa12.31□□□□□ -0.44
PDLIM2-206ENST00000409141 DNAH2Q9P225 4427 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 RBFOX3A6NFN3 312 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 CXCL1P09341 107 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 LYPD6BQ8NI32 183 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 SMIM12Q96EX1 92 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 SFRP2Q96HF1 295 aa12.3□□□□□ -0.44
PDLIM2-206ENST00000409141 A0A1W2PPQ1 181 aa12.29□□□□□ -0.44
PDLIM2-206ENST00000409141 KRTAP1-5Q9BYS1 174 aa12.29□□□□□ -0.44
PDLIM2-206ENST00000409141 TRBV20OR9-2A0A075B6H5 130 aa12.28□□□□□ -0.44
PDLIM2-206ENST00000409141 RHODO00212 210 aa12.28□□□□□ -0.44
PDLIM2-206ENST00000409141 FAM74A4Q5TZK3 123 aa12.28□□□□□ -0.44
PDLIM2-206ENST00000409141 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
PDLIM2-206ENST00000409141 A0A087WWL8 130 aa12.27□□□□□ -0.44
PDLIM2-206ENST00000409141 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.44
PDLIM2-206ENST00000409141 BIN3Q9NQY0 253 aa12.27□□□□□ -0.44
PDLIM2-206ENST00000409141 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.45
PDLIM2-206ENST00000409141 C19orf71A6NCJ1 209 aa12.27□□□□□ -0.45
PDLIM2-206ENST00000409141 CRYGDP07320 174 aa12.27□□□□□ -0.45
PDLIM2-206ENST00000409141 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.45
PDLIM2-206ENST00000409141 SSBP4Q9BWG4 385 aaPredicted RBP12.27□□□□□ -0.45
PDLIM2-206ENST00000409141 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 SNAI2O43623 268 aa12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 TIRAPP58753 221 aa12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 RPS20P60866 119 aaKnown RBP12.26□□□□□ -0.45
PDLIM2-206ENST00000409141 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms