RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 RPL39LQ96EH5 51 aaKnown RBP13□□□□□ -0.33
MATN3-201ENST00000407540 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 ANXA2RQ3ZCQ2 193 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 FBN2P35556 2912 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 IGHG2P01859 326 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 SPATA25Q9BR10 227 aa12.99□□□□□ -0.33
MATN3-201ENST00000407540 MRPL35Q9NZE8 188 aaKnown RBP12.99□□□□□ -0.33
MATN3-201ENST00000407540 NDUFA4O00483 81 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 ZC2HC1BQ5TFG8 222 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 HIF1ANQ9NWT6 349 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 A6NDX4 124 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
MATN3-201ENST00000407540 FABP2P12104 132 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 CRIP2P52943 208 aaPredicted RBP12.98□□□□□ -0.33
MATN3-201ENST00000407540 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
MATN3-201ENST00000407540 IGKCP01834 107 aa12.97□□□□□ -0.33
MATN3-201ENST00000407540 S100A4P26447 101 aaKnown RBP12.97□□□□□ -0.33
MATN3-201ENST00000407540 LAGE3Q14657 143 aa12.97□□□□□ -0.33
MATN3-201ENST00000407540 GEMIN7Q9H840 131 aaKnown RBP12.97□□□□□ -0.33
MATN3-201ENST00000407540 SORL1Q92673 2214 aa12.97□□□□□ -0.33
MATN3-201ENST00000407540 MAPK1IP1LQ8NDC0 245 aa12.97□□□□□ -0.33
MATN3-201ENST00000407540 FOXI2Q6ZQN5 318 aa12.96□□□□□ -0.33
MATN3-201ENST00000407540 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.34
MATN3-201ENST00000407540 MRAP2Q96G30 205 aa12.96□□□□□ -0.34
MATN3-201ENST00000407540 IGHV4-4A0A075B6R2 117 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 MGPP08493 103 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 RASL10AQ92737 203 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 LINC00477Q96M19 166 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
MATN3-201ENST00000407540 ACACBO00763 2458 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 FAM208BQ5VWN6 2430 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 MSMBP08118 114 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 OR9G4Q8NGQ1 327 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 PHLDA3Q9Y5J5 127 aa12.95□□□□□ -0.34
MATN3-201ENST00000407540 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 MYOZ3Q8TDC0 251 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 JPT2Q9H910 190 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 MUC4Q99102 2169 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 CREBBPQ92793 2442 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 TRAV21A0A0B4J279 112 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 DPM2O94777 84 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 GCSHP23434 173 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 FXYD2P54710 66 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 WFDC2Q14508 124 aa12.94□□□□□ -0.34
MATN3-201ENST00000407540 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
MATN3-201ENST00000407540 MXRA5Q9NR99 2828 aa12.93□□□□□ -0.34
MATN3-201ENST00000407540 RNASE3P12724 160 aaKnown RBP12.93□□□□□ -0.34
MATN3-201ENST00000407540 K7ERJ3 54 aa12.93□□□□□ -0.34
MATN3-201ENST00000407540 OVOL1O14753 267 aa12.93□□□□□ -0.34
MATN3-201ENST00000407540 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.34
MATN3-201ENST00000407540 USMG5Q96IX5 58 aa12.93□□□□□ -0.34
MATN3-201ENST00000407540 SMIM2Q9BVW6 85 aa12.93□□□□□ -0.34
MATN3-201ENST00000407540 GATA3P23771 443 aa12.92□□□□□ -0.34
MATN3-201ENST00000407540 ASIPP42127 132 aa12.92□□□□□ -0.34
MATN3-201ENST00000407540 IGKV3-20P01619 116 aa12.92□□□□□ -0.34
MATN3-201ENST00000407540 IGHV4-59P01825 116 aa12.92□□□□□ -0.34
MATN3-201ENST00000407540 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 RNF223E7ERA6 249 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 IGLV1-40P01703 118 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 AGRNO00468 2067 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 SIVA1O15304 175 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 SUMO2P61956 95 aaKnown RBP12.91□□□□□ -0.34
MATN3-201ENST00000407540 LENEPQ9Y5L5 61 aa12.91□□□□□ -0.34
MATN3-201ENST00000407540 ATP5LO75964 103 aa12.9□□□□□ -0.34
MATN3-201ENST00000407540 TSPAN13O95857 204 aa12.9□□□□□ -0.34
MATN3-201ENST00000407540 CHAC1Q9BUX1 264 aa12.9□□□□□ -0.34
MATN3-201ENST00000407540 DAZ1Q9NQZ3 744 aaKnown RBP12.9□□□□□ -0.34
MATN3-201ENST00000407540 A0A087WX48 190 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 INSL3P51460 131 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 LRRK2Q5S007 2527 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 J3QR89 54 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 ETDBQ3ZM63 59 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 DPH3P1Q9H4G8 78 aa12.89□□□□□ -0.35
MATN3-201ENST00000407540 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 SMIM13P0DJ93 91 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 CFHR3Q02985 330 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 DUX5Q96PT3 197 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 PGPEP1Q9NXJ5 209 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 ANKRD17O75179 2603 aaKnown RBP12.88□□□□□ -0.35
MATN3-201ENST00000407540 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 A0A087WWL8 130 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 SCGB3A1Q96QR1 104 aa12.88□□□□□ -0.35
MATN3-201ENST00000407540 ZNF469Q96JG9 3925 aaPredicted RBP12.87□□□□□ -0.35
MATN3-201ENST00000407540 ZNF688P0C7X2 276 aa12.87□□□□□ -0.35
MATN3-201ENST00000407540 MRPL16Q9NX20 251 aaKnown RBP12.87□□□□□ -0.35
MATN3-201ENST00000407540 SS18L2Q9UHA2 77 aa12.87□□□□□ -0.35
MATN3-201ENST00000407540 SHISA2Q6UWI4 295 aa12.87□□□□□ -0.35
MATN3-201ENST00000407540 DCANP1Q8TF63 244 aa12.87□□□□□ -0.35
MATN3-201ENST00000407540 ABCA12Q86UK0 2595 aa12.86□□□□□ -0.35
MATN3-201ENST00000407540 H3BUA1 57 aa12.86□□□□□ -0.35
MATN3-201ENST00000407540 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
MATN3-201ENST00000407540 ZNF462Q96JM2 2506 aa12.86□□□□□ -0.35
MATN3-201ENST00000407540 C2orf66Q6UXQ4 117 aa12.85□□□□□ -0.35
MATN3-201ENST00000407540 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms