RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, human

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-208	ENST00000407417	ARL17A	Q8IVW1	177 aa		6.57	□□□□□ -1.36
NFIA-208	ENST00000407417	TMEM160	Q9NX00	188 aa		6.57	□□□□□ -1.36
NFIA-208	ENST00000407417	CALY	Q9NYX4	217 aa		6.57	□□□□□ -1.36
NFIA-208	ENST00000407417	TLN2	Q9Y4G6	2542 aa		6.57	□□□□□ -1.36
NFIA-208	ENST00000407417	NAV3	Q8IVL0	2385 aa		6.57	□□□□□ -1.36
NFIA-208	ENST00000407417	TRAV8-2	A0A0B4J237	113 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	TRBV7-7	A0A0K0K1E9	115 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417		K7EMI3	77 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	SLC25A20	O43772	301 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	TCL1B	O95988	128 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	ATP5G1	P05496	136 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	HLA-DMB	P28068	263 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	FAM201A	Q5SY85	155 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	PRIMA1	Q86XR5	153 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	LINC01356	Q8N9X3	169 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	TMEM167A	Q8TBQ9	72 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	TIMD4	Q96H15	378 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	KIR2DL4	Q99706	377 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	MRPL20	Q9BYC9	149 aa	Known RBP	6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	PPDPF	Q9H3Y8	114 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	MRPL35	Q9NZE8	188 aa	Known RBP	6.56	□□□□□ -1.36
NFIA-208	ENST00000407417		M0R2P5	195 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	DUSP14	O95147	198 aa	Known RBP	6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	LGALS1	P09382	135 aa	Known RBP	6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	SAA1	P0DJI8	122 aa	Predicted RBP	6.56	□□□□□ -1.36
NFIA-208	ENST00000407417		P0DMU3	169 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	FAM231A	P0DMU4	169 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	FAM231C	P0DMU5	169 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	NDUFA11	Q86Y39	141 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	C10orf126	Q8N4M7	172 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	CD177	Q8N6Q3	437 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	HIGD1A	Q9Y241	93 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	HIVEP2	P31629	2446 aa		6.56	□□□□□ -1.36
NFIA-208	ENST00000407417	ABCA1	O95477	2261 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	IGLV2-18	A0A075B6J9	118 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	TMEM178B	H3BS89	294 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	TNFRSF6B	O95407	300 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	IGLC6	P0CF74	106 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	ORM2	P19652	201 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	CRIP1	P50238	77 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	PDE6H	Q13956	83 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	C1orf229	Q6ZS94	237 aa	Predicted RBP	6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	FLYWCH2	Q96CP2	140 aa	Known RBP	6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	LINC01587	Q99440	93 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	AAMDC	Q9H7C9	122 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	TRBV19	A0A075B6N1	114 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	IGHV3OR15-7	A0A075B7D8	119 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	TRAV8-1	A0A0A6YYK1	113 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	SMIM9	A6NGZ8	99 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417		B4DSR2	109 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417		J3KT08	172 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	ZFP2	Q6ZN57	461 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	METRN	Q9UJH8	293 aa		6.55	□□□□□ -1.36
NFIA-208	ENST00000407417	TRAV8-4	A0A0B4J246	113 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	SRRM5	B3KS81	715 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	MSMB	P08118	114 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	EDDM3A	Q14507	147 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	LAGE3	Q14657	143 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	C17orf58	Q2M2W7	97 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	ZNF826P	Q6ZT77	177 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	RNF185	Q96GF1	192 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	ODF3	Q96PU9	254 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	ABCA2	Q9BZC7	2435 aa		6.54	□□□□□ -1.36
NFIA-208	ENST00000407417	GATA4	P43694	442 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	FXYD7	P58549	80 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	WT1-AS	Q06250	92 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	ZNF833P	Q6ZTB9	187 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	DCTN5	Q9BTE1	182 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	SON	P18583	2426 aa	Known RBP	6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	ZFP36	P26651	326 aa	Known RBP	6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	SRSF9	Q13242	221 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	PAPPA-AS1	Q5QFB9	102 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	SIGLEC15	Q6ZMC9	328 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417		Q8N1Y9	231 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	C15orf53	Q8NAA6	179 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	DEFB108B	Q8NET1	73 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	OR13C6P	Q8NH95	151 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	TPPP3	Q9BW30	176 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	PRO1854	Q9UHT4	67 aa		6.53	□□□□□ -1.36
NFIA-208	ENST00000407417	IGKV1D-17	A0A075B6S4	117 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	UQCRQ	O14949	82 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	SCGB2A1	O75556	95 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	IGKV1-16	P04430	117 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	PF4V1	P10720	104 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	TMEM155	Q4W5P6	130 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	UTF1	Q5T230	341 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	ONECUT1	Q9UBC0	465 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	TRAV2	A0A0B4J234	112 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417		H3BVH4	76 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	SH2D1A	O60880	128 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	AVP	P01185	164 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	ANXA2R	Q3ZCQ2	193 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	DEFB121	Q5J5C9	76 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	LYPD2	Q6UXB3	125 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	WFDC3	Q8IUB2	231 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	BAALC	Q8WXS3	180 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	SRSF8	Q9BRL6	282 aa	Known RBP	6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	RNF7	Q9UBF6	113 aa		6.52	□□□□□ -1.37
NFIA-208	ENST00000407417	MALRD1	Q5VYJ5	2156 aa		6.51	□□□□□ -1.37
NFIA-208	ENST00000407417	SVEP1	Q4LDE5	3571 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms