RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 COPS9Q8WXC6 57 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 C2orf88Q9BSF0 95 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 TMEM242Q9NWH2 141 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 CDK12Q9NYV4 1490 aaPredicted RBP1.09□□□□□ -2.24
HMGB1P17-201ENST00000403495 E9PCH4 1651 aa1.09□□□□□ -2.24
HMGB1P17-201ENST00000403495 CEP192Q8TEP8 1941 aa1.09□□□□□ -2.24
HMGB1P17-201ENST00000403495 CACNA1BQ00975 2339 aa1.09□□□□□ -2.24
HMGB1P17-201ENST00000403495 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 SIP14410 1827 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 VIRMAQ69YN4 1812 aaKnown RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 PLXNA4Q9HCM2 1894 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 MBD5Q9P267 1494 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 SNCGO76070 127 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 APOC1P02654 83 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 CCKP06307 115 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 PIPP12273 146 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 HIST1H1DP16402 221 aaKnown RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 Q6ZQY7 126 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 SPTSSAQ969W0 71 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 SNRNP25Q9BV90 132 aaKnown RBP1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 NDUFA12Q9UI09 145 aa1.08□□□□□ -2.24
HMGB1P17-201ENST00000403495 FBN3Q75N90 2809 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 SMG6Q86US8 1419 aaKnown RBP1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 DLG5Q8TDM6 1919 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 PEAK1Q9H792 1746 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 EXPH5Q8NEV8 1989 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 LOC101927531A0A1B0GV80 90 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 ARL14EPLP0DKL9 152 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 FGF7P21781 194 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 XAF1Q6GPH4 301 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 Q86TA4 180 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 NDUFA11Q86Y39 141 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 SEC11CQ9BY50 192 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 KRTAP4-1Q9BYQ7 146 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 NCOA6Q14686 2063 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 CTTNBP2Q8WZ74 1663 aa1.07□□□□□ -2.24
HMGB1P17-201ENST00000403495 PTPRMP28827 1452 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 LOC100130705A0A1B0GUX0 176 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 NDUFB6O95139 128 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 FXYD3Q14802 87 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 RPL7L1Q6DKI1 246 aaKnown RBP1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 SLC48A1Q6P1K1 146 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 LINC00575Q6W349 94 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 DEFB132Q7Z7B7 95 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 TMEM203Q969S6 136 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 TMEM141Q96I45 108 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 CCL19Q99731 98 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 AGPAT4-IT1Q9H0P7 198 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 RERGLQ9H628 205 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 NAA60Q9H7X0 242 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 PHLPP1O60346 1717 aa1.06□□□□□ -2.24
HMGB1P17-201ENST00000403495 SCN3AQ9NY46 2000 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 TRBV30A0A0K0K1B3 111 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 TCRBV3S1A0A5B6 114 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 A6NIN4 97 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 IFNGP01579 166 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 AKAIN1P0CW23 69 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 BTG2P78543 158 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 IFI27L1Q96BM0 104 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 DAPK1P53355 1430 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 CFTRP13569 1480 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 BCL9LQ86UU0 1499 aa1.05□□□□□ -2.24
HMGB1P17-201ENST00000403495 TEX49A0A1B0GTD5 131 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 FXYD1O00168 92 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 CAV3P56539 151 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 UBE2G1P62253 170 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 WHAMMP3Q1A5X7 153 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 C9orf116Q5BN46 136 aaPredicted RBP1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 S100A7L2Q5SY68 101 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 CYP2G1PQ6ZSU1 146 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 TSKUQ8WUA8 353 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 PP6455Q8WZ26 134 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 LINC00208Q96KT6 92 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 GNG8Q9UK08 70 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 SERP1Q9Y6X1 66 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 KIAA1549Q9HCM3 1950 aa1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 EIF4G3O43432 1585 aaKnown RBP1.04□□□□□ -2.24
HMGB1P17-201ENST00000403495 UNC79Q9P2D8 2635 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 ALPK3Q96L96 1907 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 MCM3APO60318 1980 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 TRAV12-3A0A0B4J271 114 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 SPAARA0A1B0GVQ0 90 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 F6UZH7 168 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 CBLN1P23435 193 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 Q6ZS92 163 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 C5orf56Q8N8D9 126 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 CGREF1Q99674 301 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 RPRMQ9NS64 109 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 SCN3BQ9NY72 215 aa1.03□□□□□ -2.24
HMGB1P17-201ENST00000403495 ANK1P16157 1881 aa1.03□□□□□ -2.25
HMGB1P17-201ENST00000403495 CDK5RAP2Q96SN8 1893 aa1.03□□□□□ -2.25
HMGB1P17-201ENST00000403495 TENM1Q9UKZ4 2725 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 MIF4GDA9UHW6 222 aaKnown RBP1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 MCRIP1C9JLW8 97 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 SNAPC5O75971 98 aa1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 BLMP54132 1417 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P17-201ENST00000403495 NPC2P61916 151 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms