RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MYLKQ15746 1914 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 KDM5AP29375 1690 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 MYOM1P52179 1685 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 CLTCQ00610 1675 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 TOPAZ1Q8N9V7 1692 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 ABCA3Q99758 1704 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 NRXN1Q9ULB1 1477 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 SLIT1O75093 1534 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 MYH2Q9UKX2 1941 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 CLTCL1P53675 1640 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PREX2Q70Z35 1606 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PTPN23Q9H3S7 1636 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PHRF1Q9P1Y6 1649 aaKnown RBP0.54□□□□□ -2.32
CD47-203ENST00000398258 ITSN2Q9NZM3 1697 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 ZNF727A8MUV8 499 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 UQCRQO14949 82 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 EDF1O60869 148 aaKnown RBP0.54□□□□□ -2.32
CD47-203ENST00000398258 CKS2P33552 79 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PCBD1P61457 104 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PSPHP78330 225 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 CCDC153Q494R4 210 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 HSD17B12Q53GQ0 312 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 Q5XG85 94 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 CSAG1Q6PB30 78 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 LINC00575Q6W349 94 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 Q86TA4 180 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 SMIM7Q9BQ49 75 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 COMMD3Q9UBI1 195 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 MPC1Q9Y5U8 109 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 PRDM2Q13029 1718 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 RGPD3A6NKT7 1758 aaPredicted RBP0.54□□□□□ -2.32
CD47-203ENST00000398258 RGPD4Q7Z3J3 1758 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 LAMA4Q16363 1823 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 FBN2P35556 2912 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 C1orf167Q5SNV9 1468 aa0.54□□□□□ -2.32
CD47-203ENST00000398258 ADGRB1O14514 1584 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 TET1Q8NFU7 2136 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 USP32Q8NFA0 1604 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 CROCC2H7BZ55 1655 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 RREB1Q92766 1687 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 IGHV1-24A0A0C4DH33 117 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 A0A0J9YY99 117 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 LOC105371267A0A1B0GV96 52 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 A0A1B0GX51 115 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 A0A1W2PPB8 328 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 A0A1W2PPM0 123 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 A0A1W2PRS3 328 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 TMEM189A5PLL7 270 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 NUPR2A6NF83 97 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 KIR3DP1A8MWS1 328 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 ARPC5O15511 151 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 SULT1C4O75897 302 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 IGKCP01834 107 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 PRB4P10163 310 aaPredicted RBP0.53□□□□□ -2.32
CD47-203ENST00000398258 IL7P13232 177 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 ETV6P41212 452 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 RPL37AP61513 92 aaKnown RBP0.53□□□□□ -2.32
CD47-203ENST00000398258 SNRPD3P62318 126 aaKnown RBP0.53□□□□□ -2.32
CD47-203ENST00000398258 IQCJQ1A5X6 159 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 LINC00299Q6ZSB3 139 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 C3orf62Q6ZUJ4 267 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 C10orf111Q8N326 155 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 TCTEX1D1Q8N7M0 179 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 OTOSQ8NHW6 89 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 LPAR5Q9H1C0 372 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 BANF2Q9H503 90 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 DSPPQ9NZW4 1301 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 CCNB3Q8WWL7 1395 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 MED23Q9ULK4 1368 aa0.53□□□□□ -2.32
CD47-203ENST00000398258 MYO18AQ92614 2054 aaKnown RBP0.53□□□□□ -2.32
CD47-203ENST00000398258 ABCC6O95255 1503 aa0.53□□□□□ -2.33
CD47-203ENST00000398258 ARHGEF5Q12774 1597 aa0.53□□□□□ -2.33
CD47-203ENST00000398258 CDC42BPGQ6DT37 1551 aa0.53□□□□□ -2.33
CD47-203ENST00000398258 MAST1Q9Y2H9 1570 aa0.53□□□□□ -2.33
CD47-203ENST00000398258 KIF1AQ12756 1690 aa0.53□□□□□ -2.33
CD47-203ENST00000398258 RICTORQ6R327 1708 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 SIP14410 1827 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 MYO5AQ9Y4I1 1855 aaKnown RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 MYH3P11055 1940 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 TRBV30A0A0K0K1B3 111 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 IFITM5A6NNB3 132 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 SMIM24O75264 130 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 SCTP09683 121 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 SCGB1A1P11684 91 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 CCL4P13236 92 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 PDE6GP18545 87 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 DNAJB13P59910 316 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 IZUMO2Q6UXV1 221 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 LZICQ8WZA0 190 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 ANP32BQ92688 251 aaKnown RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 SPANXA1Q9NS26 97 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 MRPL36Q9P0J6 103 aaKnown RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 ANKRD36BQ8N2N9 1353 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 DAPK1P53355 1430 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 TROQ12816 1431 aaPredicted RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 NAIPQ13075 1403 aa0.52□□□□□ -2.33
CD47-203ENST00000398258 EDC4Q6P2E9 1401 aaKnown RBP0.52□□□□□ -2.33
CD47-203ENST00000398258 ANKARQ7Z5J8 1434 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms