RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ZGRF1Q86YA3 2104 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 CCL21O00585 134 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 UQCRQO14949 82 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 NPFFO15130 113 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 IGKV1-17P01599 117 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 CRIP2P52943 208 aaPredicted RBP8.85□□□□□ -0.99
PUM3-202ENST00000397885 ERCC8Q13216 396 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 EBI3Q14213 229 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 TMEM155Q4W5P6 130 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 USP9XQ93008 2570 aaPredicted RBP8.85□□□□□ -0.99
PUM3-202ENST00000397885 HIVEP3Q5T1R4 2406 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 LRRK2Q5S007 2527 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 I3L2K1 104 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 IGHV3-33P01772 117 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 ORM1P02763 201 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 ZNF80P51504 273 aaPredicted RBP8.85□□□□□ -0.99
PUM3-202ENST00000397885 ADIPOQQ15848 244 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 MSMPQ1L6U9 139 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 C3orf36Q3SXR2 165 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 OR13C6PQ8NH95 151 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 GAFA1Q96PS6 74 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 SMIM2Q9BVW6 85 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 ZNRD1Q9P1U0 126 aa8.85□□□□□ -0.99
PUM3-202ENST00000397885 RP1L1Q8IWN7 2480 aaPredicted RBP8.84□□□□□ -0.99
PUM3-202ENST00000397885 TEX49A0A1B0GTD5 131 aa8.84□□□□□ -0.99
PUM3-202ENST00000397885 HIST2H2BCQ6DN03 193 aa8.84□□□□□ -0.99
PUM3-202ENST00000397885 ZNF491Q8N8L2 437 aa8.84□□□□□ -0.99
PUM3-202ENST00000397885 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
PUM3-202ENST00000397885 POLEQ07864 2286 aa8.84□□□□□ -0.99
PUM3-202ENST00000397885 SPENQ96T58 3664 aaKnown RBP8.84□□□□□ -1
PUM3-202ENST00000397885 IGLV3-9A0A075B6K5 115 aa8.83□□□□□ -1
PUM3-202ENST00000397885 IGHV4-4A0A075B6R2 117 aa8.83□□□□□ -1
PUM3-202ENST00000397885 H3BT86 120 aa8.83□□□□□ -1
PUM3-202ENST00000397885 TNFAIP6P98066 277 aaPredicted RBP8.83□□□□□ -1
PUM3-202ENST00000397885 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
PUM3-202ENST00000397885 TRPT1Q86TN4 253 aaKnown RBP8.83□□□□□ -1
PUM3-202ENST00000397885 RNF125Q96EQ8 232 aa8.83□□□□□ -1
PUM3-202ENST00000397885 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
PUM3-202ENST00000397885 TGFAP01135 160 aa8.83□□□□□ -1
PUM3-202ENST00000397885 TMEM170BQ5T4T1 132 aa8.83□□□□□ -1
PUM3-202ENST00000397885 TMEM263Q8WUH6 116 aaKnown RBP8.83□□□□□ -1
PUM3-202ENST00000397885 ICE1Q9Y2F5 2266 aa8.83□□□□□ -1
PUM3-202ENST00000397885 IGHV3-21A0A0B4J1V1 117 aa8.82□□□□□ -1
PUM3-202ENST00000397885 MBD3L4A6NDZ8 208 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 MBD3L3A6NE82 208 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 MBD3L5A6NJ08 208 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 ACYP1P07311 99 aa8.82□□□□□ -1
PUM3-202ENST00000397885 FAM201AQ5SY85 155 aa8.82□□□□□ -1
PUM3-202ENST00000397885 FAM19A5Q7Z5A7 132 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
PUM3-202ENST00000397885 MBD3L2Q8NHZ7 208 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 ITLN2Q8WWU7 325 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 TPSG1Q9NRR2 321 aa8.82□□□□□ -1
PUM3-202ENST00000397885 IGKV2-40A0A087WW87 121 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
PUM3-202ENST00000397885 IGKV2D-40P01614 121 aaPredicted RBP8.82□□□□□ -1
PUM3-202ENST00000397885 CRYGBP07316 175 aa8.82□□□□□ -1
PUM3-202ENST00000397885 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
PUM3-202ENST00000397885 TEX36Q5VZQ5 186 aa8.82□□□□□ -1
PUM3-202ENST00000397885 TMEM219Q86XT9 240 aa8.82□□□□□ -1
PUM3-202ENST00000397885 DEFB108BQ8NET1 73 aa8.82□□□□□ -1
PUM3-202ENST00000397885 CCL13Q99616 98 aa8.82□□□□□ -1
PUM3-202ENST00000397885 SLC50A1Q9BRV3 221 aa8.82□□□□□ -1
PUM3-202ENST00000397885 CTSZQ9UBR2 303 aa8.82□□□□□ -1
PUM3-202ENST00000397885 ZNF56Q15929 161 aa8.81□□□□□ -1
PUM3-202ENST00000397885 FAM216BQ8N7L0 139 aa8.81□□□□□ -1
PUM3-202ENST00000397885 SVILO95425 2214 aa8.81□□□□□ -1
PUM3-202ENST00000397885 HERVK_113P63121 156 aa8.81□□□□□ -1
PUM3-202ENST00000397885 DUX4L9Q6RFH8 374 aaPredicted RBP8.81□□□□□ -1
PUM3-202ENST00000397885 KLHL30-AS1Q8NEE0 82 aa8.81□□□□□ -1
PUM3-202ENST00000397885 RELNP78509 3460 aa8.8□□□□□ -1
PUM3-202ENST00000397885 DOPEY1Q5JWR5 2465 aa8.8□□□□□ -1
PUM3-202ENST00000397885 TEX22C9J3V5 150 aa8.8□□□□□ -1
PUM3-202ENST00000397885 IGHV1-46P01743 117 aa8.8□□□□□ -1
PUM3-202ENST00000397885 PRRC2CQ9Y520 2896 aaKnown RBP8.8□□□□□ -1
PUM3-202ENST00000397885 CD3EP07766 207 aa8.8□□□□□ -1
PUM3-202ENST00000397885 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
PUM3-202ENST00000397885 C2orf82Q6UX34 121 aa8.8□□□□□ -1
PUM3-202ENST00000397885 IGHV1-69DA0A0B4J2H0 117 aa8.79□□□□□ -1
PUM3-202ENST00000397885 A4D1N5 150 aa8.79□□□□□ -1
PUM3-202ENST00000397885 TRGV3P03979 118 aa8.79□□□□□ -1
PUM3-202ENST00000397885 UBTD1Q9HAC8 227 aa8.79□□□□□ -1
PUM3-202ENST00000397885 RAI1Q7Z5J4 1906 aaPredicted RBP8.79□□□□□ -1
PUM3-202ENST00000397885 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
PUM3-202ENST00000397885 FAM236AA0A1B0GUQ0 79 aa8.79□□□□□ -1
PUM3-202ENST00000397885 FAM236BA0A1B0GV22 79 aa8.79□□□□□ -1
PUM3-202ENST00000397885 RBAKDNA6NC62 111 aa8.79□□□□□ -1
PUM3-202ENST00000397885 C11orf86A6NJI1 115 aa8.79□□□□□ -1
PUM3-202ENST00000397885 SUMO2P61956 95 aaKnown RBP8.79□□□□□ -1
PUM3-202ENST00000397885 C2orf66Q6UXQ4 117 aa8.79□□□□□ -1
PUM3-202ENST00000397885 Q6ZS46 218 aa8.79□□□□□ -1
PUM3-202ENST00000397885 SPTBN1Q01082 2364 aaKnown RBP8.78□□□□□ -1
PUM3-202ENST00000397885 NAV3Q8IVL0 2385 aa8.78□□□□□ -1
PUM3-202ENST00000397885 DSCAMO60469 2012 aa8.78□□□□□ -1
PUM3-202ENST00000397885 TRGV11A0A075B6L2 103 aa8.78□□□□□ -1
PUM3-202ENST00000397885 ZNF474Q6S9Z5 364 aaPredicted RBP8.78□□□□□ -1
PUM3-202ENST00000397885 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
PUM3-202ENST00000397885 ZNRF2Q8NHG8 242 aa8.78□□□□□ -1
PUM3-202ENST00000397885 Q8TAT8 98 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms