RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 A8MZ25 164 aa15.33■□□□□ 0.04
CPNE1-204ENST00000397443 F2Z2F3 143 aa15.33■□□□□ 0.04
CPNE1-204ENST00000397443 OR5AL1P0C617 328 aa15.33■□□□□ 0.04
CPNE1-204ENST00000397443 NTF3P20783 257 aa15.33■□□□□ 0.04
CPNE1-204ENST00000397443 SSBP4Q9BWG4 385 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-204ENST00000397443 SNAI2O43623 268 aa15.32■□□□□ 0.04
CPNE1-204ENST00000397443 RCHY1Q96PM5 261 aa15.32■□□□□ 0.04
CPNE1-204ENST00000397443 LINC00467Q9BRT7 94 aa15.32■□□□□ 0.04
CPNE1-204ENST00000397443 RAB5AP20339 215 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 RPS10P46783 165 aaKnown RBP15.31■□□□□ 0.04
CPNE1-204ENST00000397443 RRN3P1Q2M238 152 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 DNLZQ5SXM8 178 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 UBE2CO00762 179 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 HBBP68871 147 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 ZNF415Q09FC8 603 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 RIGQ13278 110 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 C9orf85Q96MD7 179 aa15.31■□□□□ 0.04
CPNE1-204ENST00000397443 EMP1P54849 157 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 DMRTA1Q5VZB9 504 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 C11orf72Q8NBR9 251 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 MRAPQ8TCY5 172 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 RETNQ9HD89 108 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 SCRT2Q9NQ03 307 aa15.3■□□□□ 0.04
CPNE1-204ENST00000397443 OR11H2Q8NH07 326 aa15.29■□□□□ 0.04
CPNE1-204ENST00000397443 RNASE8Q8TDE3 154 aaKnown RBP15.29■□□□□ 0.04
CPNE1-204ENST00000397443 A0A1B0GXF2 115 aa15.29■□□□□ 0.04
CPNE1-204ENST00000397443 MED14OSP0DP75 135 aa15.29■□□□□ 0.04
CPNE1-204ENST00000397443 ATP5L2Q7Z4Y8 100 aa15.29■□□□□ 0.04
CPNE1-204ENST00000397443 TMEM263Q8WUH6 116 aaKnown RBP15.29■□□□□ 0.04
CPNE1-204ENST00000397443 X6R8D5 127 aa15.29■□□□□ 0.04
CPNE1-204ENST00000397443 SNURFLB1AK76 121 aa15.27■□□□□ 0.04
CPNE1-204ENST00000397443 Q6ZWC4 215 aa15.27■□□□□ 0.04
CPNE1-204ENST00000397443 CNFNQ9BYD5 112 aa15.27■□□□□ 0.04
CPNE1-204ENST00000397443 CACNG7P62955 275 aa15.27■□□□□ 0.03
CPNE1-204ENST00000397443 FRZBQ92765 325 aa15.27■□□□□ 0.03
CPNE1-204ENST00000397443 RNF183Q96D59 192 aa15.27■□□□□ 0.03
CPNE1-204ENST00000397443 DEFB4AO15263 64 aa15.26■□□□□ 0.03
CPNE1-204ENST00000397443 ZNF876PQ49A33 203 aa15.26■□□□□ 0.03
CPNE1-204ENST00000397443 ZFP82Q8N141 532 aa15.26■□□□□ 0.03
CPNE1-204ENST00000397443 C16orf74Q96GX8 76 aa15.26■□□□□ 0.03
CPNE1-204ENST00000397443 NOP10Q9NPE3 64 aaKnown RBP15.26■□□□□ 0.03
CPNE1-204ENST00000397443 MRPL16Q9NX20 251 aaKnown RBP15.26■□□□□ 0.03
CPNE1-204ENST00000397443 TMEM136Q6ZRR5 245 aa15.25■□□□□ 0.03
CPNE1-204ENST00000397443 SBSPONQ8IVN8 264 aa15.25■□□□□ 0.03
CPNE1-204ENST00000397443 JPT2Q9H910 190 aa15.25■□□□□ 0.03
CPNE1-204ENST00000397443 EVI2AP22794 236 aa15.25■□□□□ 0.03
CPNE1-204ENST00000397443 TRAPPC1Q9Y5R8 145 aa15.25■□□□□ 0.03
CPNE1-204ENST00000397443 PLAC8L1A1L4L8 177 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 M0R2P5 195 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 SYT8Q8NBV8 401 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 OVOL2Q9BRP0 275 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 IGHV4-4A0A075B6R2 117 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 TRGV1A0A0A0MS02 117 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 TRGC2P03986 189 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 FABP9Q0Z7S8 132 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 WDR73Q6P4I2 378 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 ZNF493Q6ZR52 646 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 GNB1LQ9BYB4 327 aa15.23■□□□□ 0.03
CPNE1-204ENST00000397443 A0A1B0GW15 77 aa15.22■□□□□ 0.03
CPNE1-204ENST00000397443 RASL11AQ6T310 242 aa15.22■□□□□ 0.03
CPNE1-204ENST00000397443 C14orf178Q8N769 122 aaPredicted RBP15.22■□□□□ 0.03
CPNE1-204ENST00000397443 SPXQ9BT56 116 aa15.22■□□□□ 0.03
CPNE1-204ENST00000397443 MRPL18Q9H0U6 180 aaKnown RBP15.22■□□□□ 0.03
CPNE1-204ENST00000397443 IGHV4-28A0A0C4DH34 117 aa15.21■□□□□ 0.03
CPNE1-204ENST00000397443 S100A8P05109 93 aa15.21■□□□□ 0.03
CPNE1-204ENST00000397443 SLAQ13239 276 aa15.21■□□□□ 0.03
CPNE1-204ENST00000397443 KIAA1644Q3SXP7 199 aa15.21■□□□□ 0.03
CPNE1-204ENST00000397443 IL17DQ8TAD2 202 aa15.21■□□□□ 0.03
CPNE1-204ENST00000397443 A0A087WWL8 130 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 SMIM9A6NGZ8 99 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 NXPH4O95158 308 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 Q6ZTI0 123 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 AMN1Q8IY45 258 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 TENM3Q9P273 2699 aa15.21■□□□□ 0.02
CPNE1-204ENST00000397443 HLA-DQA1P01909 254 aa15.2■□□□□ 0.02
CPNE1-204ENST00000397443 FAM74A4Q5TZK3 123 aa15.2■□□□□ 0.02
CPNE1-204ENST00000397443 SMIM15Q7Z3B0 74 aa15.2■□□□□ 0.02
CPNE1-204ENST00000397443 AP1S3Q96PC3 154 aa15.2■□□□□ 0.02
CPNE1-204ENST00000397443 TRGC1P0CF51 173 aa15.19■□□□□ 0.02
CPNE1-204ENST00000397443 APCSP02743 223 aa15.19■□□□□ 0.02
CPNE1-204ENST00000397443 COX19Q49B96 90 aa15.19■□□□□ 0.02
CPNE1-204ENST00000397443 SAMD10Q9BYL1 202 aa15.19■□□□□ 0.02
CPNE1-204ENST00000397443 TMEM191AQ9H0A3 160 aa15.19■□□□□ 0.02
CPNE1-204ENST00000397443 MT-ND6P03923 174 aa15.18■□□□□ 0.02
CPNE1-204ENST00000397443 Q8NAQ8 132 aa15.18■□□□□ 0.02
CPNE1-204ENST00000397443 IGHV3-73A0A0B4J1V6 119 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 GAGE12BA1L429 117 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 GAGE7O76087 117 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 MGPP08493 103 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 GAGE12FP0CL80 117 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 GAGE12GP0CL81 117 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 GAGE12IP0CL82 117 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 MIFP14174 115 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 DAZ2Q13117 558 aaKnown RBP15.17■□□□□ 0.02
CPNE1-204ENST00000397443 TMA7Q9Y2S6 64 aaKnown RBP15.17■□□□□ 0.02
CPNE1-204ENST00000397443 SMIM17P0DL12 118 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 TP53TG1Q9Y2A0 90 aa15.17■□□□□ 0.02
CPNE1-204ENST00000397443 FAM104BQ5XKR9 115 aa15.16■□□□□ 0.02
CPNE1-204ENST00000397443 DEFB130BP0DP73 79 aa15.15■□□□□ 0.02
CPNE1-204ENST00000397443 DEFB130AP0DP74 79 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms