RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 BTF3L4Q96K17 158 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 C9orf85Q96MD7 179 aa12.23□□□□□ -0.45
TSPAN4-205ENST00000397406 COLCA2A8K830 154 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 F2Z2F3 143 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 SPINK4O60575 86 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 Q6ZWC4 215 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 SBSPONQ8IVN8 264 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 WWC2-AS2Q96NR7 200 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
TSPAN4-205ENST00000397406 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
TSPAN4-205ENST00000397406 U3KQK5 164 aa12.21□□□□□ -0.45
TSPAN4-205ENST00000397406 X6R8D5 127 aa12.21□□□□□ -0.45
TSPAN4-205ENST00000397406 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 A0A1B0GUT8 65 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 SPRY2O43597 315 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 ZNF415Q09FC8 603 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 MRPL54Q6P161 138 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 RNF183Q96D59 192 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 RRN3P1Q2M238 152 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 WDR73Q6P4I2 378 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 FAM210BQ96KR6 192 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 GSN-AS1Q9NRJ2 163 aa12.2□□□□□ -0.46
TSPAN4-205ENST00000397406 STAB2Q8WWQ8 2551 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 NXPH4O95158 308 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 BORCS7Q96B45 105 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 C16orf74Q96GX8 76 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
TSPAN4-205ENST00000397406 PLAC8L1A1L4L8 177 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 NTF3P20783 257 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 CACNG7P62955 275 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 RIGQ13278 110 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
TSPAN4-205ENST00000397406 SSTP61278 116 aa12.17□□□□□ -0.46
TSPAN4-205ENST00000397406 HBBP68871 147 aa12.17□□□□□ -0.46
TSPAN4-205ENST00000397406 SPANXN1Q5VSR9 72 aa12.17□□□□□ -0.46
TSPAN4-205ENST00000397406 OR11H2Q8NH07 326 aa12.17□□□□□ -0.46
TSPAN4-205ENST00000397406 TP53TG1Q9Y2A0 90 aa12.17□□□□□ -0.46
TSPAN4-205ENST00000397406 A0A1B0GW15 77 aa12.16□□□□□ -0.46
TSPAN4-205ENST00000397406 M0R381 172 aa12.16□□□□□ -0.46
TSPAN4-205ENST00000397406 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
TSPAN4-205ENST00000397406 OVOL2Q9BRP0 275 aa12.16□□□□□ -0.46
TSPAN4-205ENST00000397406 SPXQ9BT56 116 aa12.16□□□□□ -0.46
TSPAN4-205ENST00000397406 RAB5AP20339 215 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 CAMPP49913 170 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 TWIST1Q15672 202 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 DMRTA1Q5VZB9 504 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 ZFP82Q8N141 532 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 PTH2Q96A98 100 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 RETNQ9HD89 108 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
TSPAN4-205ENST00000397406 M0R2P5 195 aa12.14□□□□□ -0.47
TSPAN4-205ENST00000397406 TMEM136Q6ZRR5 245 aa12.14□□□□□ -0.47
TSPAN4-205ENST00000397406 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 MIFP14174 115 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 DAZ2Q13117 558 aaKnown RBP12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 COX19Q49B96 90 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 Q8NAQ8 132 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 GNB1LQ9BYB4 327 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 NACAE9PAV3 2078 aa12.13□□□□□ -0.47
TSPAN4-205ENST00000397406 S100A8P05109 93 aa12.12□□□□□ -0.47
TSPAN4-205ENST00000397406 ZNF876PQ49A33 203 aa12.12□□□□□ -0.47
TSPAN4-205ENST00000397406 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
TSPAN4-205ENST00000397406 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
TSPAN4-205ENST00000397406 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 RPS10P46783 165 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 TM2D3Q9BRN9 247 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 NOP10Q9NPE3 64 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 RAB4BP61018 213 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 RASL10AQ92737 203 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 JPT2Q9H910 190 aa12.11□□□□□ -0.47
TSPAN4-205ENST00000397406 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 MT-ND6P03923 174 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 EVI2AP22794 236 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 Q6ZTI0 123 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 AP1S3Q96PC3 154 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
TSPAN4-205ENST00000397406 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
TSPAN4-205ENST00000397406 EMP1P54849 157 aa12.09□□□□□ -0.47
TSPAN4-205ENST00000397406 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
TSPAN4-205ENST00000397406 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
TSPAN4-205ENST00000397406 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
TSPAN4-205ENST00000397406 DYNC2H1Q8NCM8 4307 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms