RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MDFICQ9P1T7 246 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 PRM2P04554 102 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 SCRT2Q9NQ03 307 aa14.85□□□□□ -0.03
VCPKMT-202ENST00000395860 KIR2DL5BA0A0G2JN68 375 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 KIR2DL5BA0A0G2JPC4 375 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 SPRY2O43597 315 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 HLA-DQA1P01909 254 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 MT-ND6P03923 174 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 FABP9Q0Z7S8 132 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 KIR2DL5AQ8N109 375 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 KIR2DL5BQ8NHK3 375 aa14.84□□□□□ -0.03
VCPKMT-202ENST00000395860 C1orf196B1AJZ1 125 aa14.83□□□□□ -0.03
VCPKMT-202ENST00000395860 C9orf85Q96MD7 179 aa14.83□□□□□ -0.03
VCPKMT-202ENST00000395860 MRPL18Q9H0U6 180 aaKnown RBP14.83□□□□□ -0.03
VCPKMT-202ENST00000395860 TMA7Q9Y2S6 64 aaKnown RBP14.83□□□□□ -0.03
VCPKMT-202ENST00000395860 PKD1L1Q8TDX9 2849 aa14.83□□□□□ -0.04
VCPKMT-202ENST00000395860 M0R381 172 aa14.83□□□□□ -0.04
VCPKMT-202ENST00000395860 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.04
VCPKMT-202ENST00000395860 IGHV4-4A0A075B6R2 117 aa14.82□□□□□ -0.04
VCPKMT-202ENST00000395860 ZNF415Q09FC8 603 aa14.82□□□□□ -0.04
VCPKMT-202ENST00000395860 MUC4Q99102 2169 aa14.82□□□□□ -0.04
VCPKMT-202ENST00000395860 ZNF705AQ6ZN79 300 aaPredicted RBP14.81□□□□□ -0.04
VCPKMT-202ENST00000395860 ZFP82Q8N141 532 aa14.8□□□□□ -0.04
VCPKMT-202ENST00000395860 GATD1Q8NB37 220 aa14.8□□□□□ -0.04
VCPKMT-202ENST00000395860 AZU1P20160 251 aa14.8□□□□□ -0.04
VCPKMT-202ENST00000395860 ZNF493Q6ZR52 646 aa14.8□□□□□ -0.04
VCPKMT-202ENST00000395860 A8MZ25 164 aa14.79□□□□□ -0.04
VCPKMT-202ENST00000395860 APCSP02743 223 aa14.79□□□□□ -0.04
VCPKMT-202ENST00000395860 KRTAP21-3Q3LHN1 58 aa14.79□□□□□ -0.04
VCPKMT-202ENST00000395860 GSN-AS1Q9NRJ2 163 aa14.79□□□□□ -0.04
VCPKMT-202ENST00000395860 UBE2CO00762 179 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 RAB5BP61020 215 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 SLAQ13239 276 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 DMRTA1Q5VZB9 504 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 SMIM15Q7Z3B0 74 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 C11orf72Q8NBR9 251 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 SYT8Q8NBV8 401 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 PHOX2AO14813 284 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 NXPH4O95158 308 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 RRN3P1Q2M238 152 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 RCHY1Q96PM5 261 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 TMEM191AQ9H0A3 160 aa14.78□□□□□ -0.04
VCPKMT-202ENST00000395860 TRGC1P0CF51 173 aa14.77□□□□□ -0.05
VCPKMT-202ENST00000395860 DEFB135Q30KP9 77 aa14.77□□□□□ -0.05
VCPKMT-202ENST00000395860 RNASE8Q8TDE3 154 aaKnown RBP14.77□□□□□ -0.05
VCPKMT-202ENST00000395860 KIAA1644Q3SXP7 199 aa14.76□□□□□ -0.05
VCPKMT-202ENST00000395860 EVI2AP22794 236 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 C16orf74Q96GX8 76 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 SPXQ9BT56 116 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 M0R2P5 195 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 ZNF876PQ49A33 203 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 KPRPQ5T749 579 aaPredicted RBP14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 AMN1Q8IY45 258 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 AP1S3Q96PC3 154 aa14.75□□□□□ -0.05
VCPKMT-202ENST00000395860 FAM104BQ5XKR9 115 aa14.74□□□□□ -0.05
VCPKMT-202ENST00000395860 PRB2P02812 416 aaPredicted RBP14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BKO60814 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BJP06899 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BOP23527 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BBP33778 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BDP58876 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BCP62807 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST2H2BEQ16778 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 Q6ZWC4 215 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 C14orf178Q8N769 122 aaPredicted RBP14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BHQ93079 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BNQ99877 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 HIST1H2BMQ99879 126 aa14.73□□□□□ -0.05
VCPKMT-202ENST00000395860 SMIM9A6NGZ8 99 aa14.72□□□□□ -0.05
VCPKMT-202ENST00000395860 IL17DQ8TAD2 202 aa14.72□□□□□ -0.05
VCPKMT-202ENST00000395860 DPH3P1Q9H4G8 78 aa14.72□□□□□ -0.05
VCPKMT-202ENST00000395860 X6R8D5 127 aa14.72□□□□□ -0.05
VCPKMT-202ENST00000395860 PTH2Q96A98 100 aa14.71□□□□□ -0.05
VCPKMT-202ENST00000395860 SMIM17P0DL12 118 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 RAB4AP20338 218 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 OR11H2Q8NH07 326 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 JPT2Q9H910 190 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 MRPL16Q9NX20 251 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 PLAC8L1A1L4L8 177 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 SRIP30626 198 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 MRPL51Q4U2R6 128 aaKnown RBP14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 RNF183Q96D59 192 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 RNF185Q96GF1 192 aa14.7□□□□□ -0.06
VCPKMT-202ENST00000395860 PIK3CD-AS1Q5SR53 167 aa14.69□□□□□ -0.06
VCPKMT-202ENST00000395860 NOP10Q9NPE3 64 aaKnown RBP14.69□□□□□ -0.06
VCPKMT-202ENST00000395860 MGPP08493 103 aa14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 DAZ2Q13117 558 aaKnown RBP14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 A0A087WWL8 130 aa14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 TRGV1A0A0A0MS02 117 aa14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 K7EIL1 84 aa14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 FAM74A4Q5TZK3 123 aa14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 ALKBH7Q9BT30 221 aaPredicted RBP14.68□□□□□ -0.06
VCPKMT-202ENST00000395860 D6R8Y8 96 aa14.67□□□□□ -0.06
VCPKMT-202ENST00000395860 EMP1P54849 157 aa14.67□□□□□ -0.06
VCPKMT-202ENST00000395860 RASL10AQ92737 203 aa14.67□□□□□ -0.06
VCPKMT-202ENST00000395860 KIF25-AS1Q9Y6Z4 181 aa14.67□□□□□ -0.06
VCPKMT-202ENST00000395860 A8MWV9 139 aa14.66□□□□□ -0.06
VCPKMT-202ENST00000395860 S100A6P06703 90 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms