RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 Q6ZQT7 251 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
VAPB-202ENST00000395802 PHLDA3Q9Y5J5 127 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 SNAI2O43623 268 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 GIG44P09565 113 aaPredicted RBP9.98□□□□□ -0.81
VAPB-202ENST00000395802 HTN1P15515 57 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 SNRPEP62304 92 aaKnown RBP9.98□□□□□ -0.81
VAPB-202ENST00000395802 LYZL1Q6UWQ5 148 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 CSNK1G2-AS1Q8NCQ2 148 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 CNFNQ9BYD5 112 aa9.98□□□□□ -0.81
VAPB-202ENST00000395802 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
VAPB-202ENST00000395802 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 GNRH2O43555 120 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 ARMS2P0C7Q2 107 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 RBMY1A1P0DJD3 496 aaKnown RBP9.97□□□□□ -0.81
VAPB-202ENST00000395802 RBMY1CP0DJD4 496 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 HBBP68871 147 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 RBMY1FQ15415 496 aaKnown RBP9.97□□□□□ -0.81
VAPB-202ENST00000395802 SPANXN1Q5VSR9 72 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 C1orf158Q8N1D5 194 aa9.97□□□□□ -0.81
VAPB-202ENST00000395802 IGHV3-16A0A0C4DH30 117 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 SMIM9A6NGZ8 99 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 H3BVH4 76 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 ZNF415Q09FC8 603 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 ZNF705AQ6ZN79 300 aaPredicted RBP9.96□□□□□ -0.81
VAPB-202ENST00000395802 Q6ZWC4 215 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.81
VAPB-202ENST00000395802 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 CAMPP49913 170 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 RAB4BP61018 213 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 TWIST1Q15672 202 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 SYT8Q8NBV8 401 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 TMEM263Q8WUH6 116 aaKnown RBP9.96□□□□□ -0.82
VAPB-202ENST00000395802 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.82
VAPB-202ENST00000395802 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
VAPB-202ENST00000395802 NDUFA6P56556 154 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 SLAQ13239 276 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 RRN3P1Q2M238 152 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 C16orf74Q96GX8 76 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 RCHY1Q96PM5 261 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 SPXQ9BT56 116 aa9.95□□□□□ -0.82
VAPB-202ENST00000395802 NTF3P20783 257 aa9.94□□□□□ -0.82
VAPB-202ENST00000395802 TIMM8BQ9Y5J9 83 aaPredicted RBP9.94□□□□□ -0.82
VAPB-202ENST00000395802 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
VAPB-202ENST00000395802 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
VAPB-202ENST00000395802 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
VAPB-202ENST00000395802 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
VAPB-202ENST00000395802 NDUFAF3Q9BU61 184 aa9.93□□□□□ -0.82
VAPB-202ENST00000395802 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
VAPB-202ENST00000395802 M0R381 172 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 APCSP02743 223 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 HOXA5P20719 270 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 OR10AG1Q8NH19 301 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 RNASE8Q8TDE3 154 aaKnown RBP9.92□□□□□ -0.82
VAPB-202ENST00000395802 PTH2Q96A98 100 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
VAPB-202ENST00000395802 NOTCH1P46531 2555 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 M0R2P5 195 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 DEFB135Q30KP9 77 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 RNF183Q96D59 192 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 NXPH4O95158 308 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 SSTP61278 116 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 C11orf72Q8NBR9 251 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 GSN-AS1Q9NRJ2 163 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
VAPB-202ENST00000395802 SMIM17P0DL12 118 aa9.9□□□□□ -0.82
VAPB-202ENST00000395802 MIFP14174 115 aa9.9□□□□□ -0.82
VAPB-202ENST00000395802 DAZ2Q13117 558 aaKnown RBP9.9□□□□□ -0.82
VAPB-202ENST00000395802 LGALS9BQ3B8N2 356 aa9.9□□□□□ -0.82
VAPB-202ENST00000395802 ZNF876PQ49A33 203 aa9.9□□□□□ -0.82
VAPB-202ENST00000395802 TMEM191AQ9H0A3 160 aa9.9□□□□□ -0.82
VAPB-202ENST00000395802 MUC21A0A0G2JKD1 596 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 MUC21A0A140T8X8 626 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 SPRY2O43597 315 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 SRIP30626 198 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 HIST3H2BBQ8N257 126 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 OR11H2Q8NH07 326 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 MUC4Q99102 2169 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 IFITM10A6NMD0 228 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 AZU1P20160 251 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
VAPB-202ENST00000395802 A8MWV9 139 aa9.88□□□□□ -0.83
VAPB-202ENST00000395802 Q0VG73 95 aa9.88□□□□□ -0.83
VAPB-202ENST00000395802 RASL10AQ92737 203 aa9.88□□□□□ -0.83
VAPB-202ENST00000395802 DPH3P1Q9H4G8 78 aa9.88□□□□□ -0.83
VAPB-202ENST00000395802 K7EIL1 84 aa9.87□□□□□ -0.83
VAPB-202ENST00000395802 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
VAPB-202ENST00000395802 ALKBH7Q9BT30 221 aaPredicted RBP9.87□□□□□ -0.83
VAPB-202ENST00000395802 MSRB1Q9NZV6 116 aa9.87□□□□□ -0.83
VAPB-202ENST00000395802 X6R8D5 127 aa9.87□□□□□ -0.83
VAPB-202ENST00000395802 PRM2P04554 102 aa9.86□□□□□ -0.83
VAPB-202ENST00000395802 LINC00310P59036 64 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms