RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TCEAL7Q9BRU2 100 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 ZFP30Q9Y2G7 519 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 A0A0D9SG52 128 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 KANTRA0A1W2PQU2 76 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 UMAD1C9J7I0 102 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 RS1O15537 224 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 ASIPP42127 132 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 CFAP126Q5VTH2 177 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 Q86TA4 180 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 FMC1Q96HJ9 113 aa9.39□□□□□ -0.91
CXCL12-205ENST00000395794 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 PGPEP1LA6NFU8 196 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 HMSDA8MTL9 139 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 B4DEV8 164 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 SEC11BP0C7V7 166 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 FHITP49789 147 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 EIF5AP63241 154 aaKnown RBP9.38□□□□□ -0.91
CXCL12-205ENST00000395794 RHOHQ15669 191 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 LGALSLQ3ZCW2 172 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-205ENST00000395794 ZNF506Q5JVG8 444 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 XP32Q5T750 250 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 SLC25A29Q8N8R3 303 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 SFT2D1Q8WV19 159 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 ZNF471Q9BX82 626 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-205ENST00000395794 DNAH11Q96DT5 4516 aa9.38□□□□□ -0.91
CXCL12-205ENST00000395794 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 A8MWV9 139 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
CXCL12-205ENST00000395794 RNASE3P12724 160 aaKnown RBP9.37□□□□□ -0.91
CXCL12-205ENST00000395794 TIRAPP58753 221 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 C10orf126Q8N4M7 172 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 SYT8Q8NBV8 401 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 FAM213BQ8TBF2 198 aa9.37□□□□□ -0.91
CXCL12-205ENST00000395794 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
CXCL12-205ENST00000395794 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 BCL2L11O43521 198 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 PFDN1O60925 122 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 AKR1C3P42330 323 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 DPPA3Q6W0C5 159 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 MSRB1Q9NZV6 116 aa9.36□□□□□ -0.91
CXCL12-205ENST00000395794 PCLOQ9Y6V0 5065 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 M0R036 132 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 PAGE4O60829 102 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 S100A9P06702 114 aaKnown RBP9.35□□□□□ -0.91
CXCL12-205ENST00000395794 CRYGDP07320 174 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 OR10J3Q5JRS4 329 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 ZC2HC1AQ96GY0 325 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
CXCL12-205ENST00000395794 IGHV3-38A0A0C4DH36 116 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 TRBV6-1A0A0K0K1D8 114 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 A0A1B0GV50 99 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 KRBOX1C9JBD0 128 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 H3BVH4 76 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 SH2D1AO60880 128 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 CDK2AP2O75956 126 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 C4orf48Q5BLP8 95 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-205ENST00000395794 COX8CQ7Z4L0 72 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 OR11H4Q8NGC9 324 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 MBD3L1Q8WWY6 194 aa9.34□□□□□ -0.91
CXCL12-205ENST00000395794 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 LTAP01374 205 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 H2AFB1P0C5Y9 115 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 ARMS2P0C7Q2 107 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 TPT1P13693 172 aaKnown RBP9.33□□□□□ -0.92
CXCL12-205ENST00000395794 ATP6V0E2Q8NHE4 81 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 PARLQ9H300 379 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 PHLDA3Q9Y5J5 127 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 TNFRSF18Q9Y5U5 241 aa9.33□□□□□ -0.92
CXCL12-205ENST00000395794 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 RHODO00212 210 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 CRIP1P50238 77 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 DNLZQ5SXM8 178 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 EIF5AL1Q6IS14 154 aaKnown RBP9.32□□□□□ -0.92
CXCL12-205ENST00000395794 TMUB2Q71RG4 321 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 RYR1P21817 5038 aa9.32□□□□□ -0.92
CXCL12-205ENST00000395794 PSCAO43653 123 aa9.31□□□□□ -0.92
CXCL12-205ENST00000395794 ZNF674Q2M3X9 581 aa9.31□□□□□ -0.92
CXCL12-205ENST00000395794 LINC01556Q5JQF7 62 aa9.31□□□□□ -0.92
CXCL12-205ENST00000395794 LELP1Q5T871 98 aa9.31□□□□□ -0.92
CXCL12-205ENST00000395794 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
CXCL12-205ENST00000395794 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 TEX46H3BTG2 121 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 GAGE1Q13065 139 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 GAGE4Q13068 117 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 GAGE5Q13069 117 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 FAM74A4Q5TZK3 123 aa9.3□□□□□ -0.92
CXCL12-205ENST00000395794 ZFP82Q8N141 532 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms