RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 DLX4Q92988 240 aaPredicted RBP12.03□□□□□ -0.48
SMARCD1-202ENST00000394963 DNAJC9-AS1A6NH13 148 aa12.03□□□□□ -0.48
SMARCD1-202ENST00000394963 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
SMARCD1-202ENST00000394963 CFHR3Q02985 330 aa12.03□□□□□ -0.48
SMARCD1-202ENST00000394963 MIEN1Q9BRT3 115 aa12.03□□□□□ -0.48
SMARCD1-202ENST00000394963 LINC01619G3V211 115 aa12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 PTTG1IPP53801 180 aa12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 Q6YL49 198 aa12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 OR2K2Q8NGT1 345 aa12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 PEMTQ9UBM1 199 aa12.02□□□□□ -0.48
SMARCD1-202ENST00000394963 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 FAM231BA6NCW3 169 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 RAX2Q96IS3 184 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 A0A087X0K7 114 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 C2orf70A6NJV1 201 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 STHQ8IWL8 128 aa12.02□□□□□ -0.49
SMARCD1-202ENST00000394963 SLC25A34Q6PIV7 304 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 GTSCR1Q86UQ5 136 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 CHCHD1Q96BP2 118 aaKnown RBP12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 SCGB3A1Q96QR1 104 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 SNHG12Q9BXW3 62 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 PSMB8P28062 276 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 TSPOP30536 169 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 MDFICQ9P1T7 246 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
SMARCD1-202ENST00000394963 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 ELANEP08246 267 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 CD28P10747 220 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 A0A1B0GW15 77 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 DKK2Q9UBU2 259 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 MGAM2Q2M2H8 2515 aa12□□□□□ -0.49
SMARCD1-202ENST00000394963 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
SMARCD1-202ENST00000394963 ZNF702PQ9H963 129 aa11.99□□□□□ -0.49
SMARCD1-202ENST00000394963 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
SMARCD1-202ENST00000394963 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
SMARCD1-202ENST00000394963 CDKN1BP46527 198 aa11.98□□□□□ -0.49
SMARCD1-202ENST00000394963 Q6ZSV7 163 aa11.98□□□□□ -0.49
SMARCD1-202ENST00000394963 NPIPB6E9PJ23 425 aa11.98□□□□□ -0.49
SMARCD1-202ENST00000394963 LAMTOR2Q9Y2Q5 125 aa11.98□□□□□ -0.49
SMARCD1-202ENST00000394963 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
SMARCD1-202ENST00000394963 MPV17L2Q567V2 206 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 CCL24O00175 119 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 GCSHP23434 173 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 SYT8Q8NBV8 401 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 KIR2DL4Q99706 377 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 SPATA12Q7Z6I5 190 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 Q8N1Y9 231 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 URB1-AS1Q96HZ7 61 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 DPH3P1Q9H4G8 78 aa11.97□□□□□ -0.49
SMARCD1-202ENST00000394963 H3BUA1 57 aa11.96□□□□□ -0.49
SMARCD1-202ENST00000394963 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
SMARCD1-202ENST00000394963 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
SMARCD1-202ENST00000394963 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.49
SMARCD1-202ENST00000394963 OR9G4Q8NGQ1 327 aa11.96□□□□□ -0.49
SMARCD1-202ENST00000394963 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 SFTA2Q6UW10 78 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 ZFAND2AQ8N6M9 145 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 NBEAL1Q6ZS30 2694 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 TMEM170BQ5T4T1 132 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 GPHB5Q86YW7 130 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 WFDC10AQ9H1F0 79 aa11.96□□□□□ -0.5
SMARCD1-202ENST00000394963 K7EMI3 77 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 COL6A5A8TX70 2615 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 PPBPP02775 128 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 ZNF747Q9BV97 191 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 NXT2Q9NPJ8 142 aaKnown RBP11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 TRGV1A0A0A0MS02 117 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 IGLC3P0DOY3 106 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 ST20Q9HBF5 79 aa11.95□□□□□ -0.5
SMARCD1-202ENST00000394963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 LAGE3Q14657 143 aa11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 LINC01559Q495D7 138 aa11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 KLF5Q13887 457 aaPredicted RBP11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 MRPL16Q9NX20 251 aaKnown RBP11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 NOTCH1P46531 2555 aa11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 STAB1Q9NY15 2570 aa11.94□□□□□ -0.5
SMARCD1-202ENST00000394963 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 MUC4Q99102 2169 aa11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 COL5A1-AS1Q5SY13 56 aa11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 BAHCC1Q9P281 2608 aa11.93□□□□□ -0.5
SMARCD1-202ENST00000394963 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
SMARCD1-202ENST00000394963 IGLC6P0CF74 106 aa11.92□□□□□ -0.5
SMARCD1-202ENST00000394963 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
SMARCD1-202ENST00000394963 PCP4P48539 62 aa11.92□□□□□ -0.5
SMARCD1-202ENST00000394963 PET117Q6UWS5 81 aa11.92□□□□□ -0.5
SMARCD1-202ENST00000394963 TRGV2A0A075B6R0 118 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 P0DMU3 169 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
SMARCD1-202ENST00000394963 TNFRSF18Q9Y5U5 241 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms