RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
PHTF1-205ENST00000393357 IGHV3-11P01762 117 aa12.53□□□□□ -0.4
PHTF1-205ENST00000393357 SUMO2P61956 95 aaKnown RBP12.53□□□□□ -0.4
PHTF1-205ENST00000393357 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
PHTF1-205ENST00000393357 ZNF672Q499Z4 452 aaPredicted RBP12.53□□□□□ -0.4
PHTF1-205ENST00000393357 FAM57AQ8TBR7 257 aa12.53□□□□□ -0.4
PHTF1-205ENST00000393357 CENPEQ02224 2701 aa12.53□□□□□ -0.4
PHTF1-205ENST00000393357 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.4
PHTF1-205ENST00000393357 SHISA9B4DS77 424 aa12.52□□□□□ -0.4
PHTF1-205ENST00000393357 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.4
PHTF1-205ENST00000393357 ANKRD29Q8N6D5 301 aa12.52□□□□□ -0.4
PHTF1-205ENST00000393357 PRSS2P07478 247 aa12.52□□□□□ -0.41
PHTF1-205ENST00000393357 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
PHTF1-205ENST00000393357 RASL10AQ92737 203 aa12.52□□□□□ -0.41
PHTF1-205ENST00000393357 HRNRQ86YZ3 2850 aaPredicted RBP12.52□□□□□ -0.41
PHTF1-205ENST00000393357 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
PHTF1-205ENST00000393357 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.52□□□□□ -0.41
PHTF1-205ENST00000393357 CD3EP07766 207 aa12.51□□□□□ -0.41
PHTF1-205ENST00000393357 MSRB2Q9Y3D2 182 aa12.51□□□□□ -0.41
PHTF1-205ENST00000393357 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
PHTF1-205ENST00000393357 TP53TG1Q9Y2A0 90 aa12.51□□□□□ -0.41
PHTF1-205ENST00000393357 A8MWV9 139 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 TNFRSF13BO14836 293 aaPredicted RBP12.5□□□□□ -0.41
PHTF1-205ENST00000393357 SCGB1A1P11684 91 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 IGFL2Q6UWQ7 119 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 MUC6Q6W4X9 2439 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 ATP6V0E1O15342 81 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 BUB3O43684 328 aa12.5□□□□□ -0.41
PHTF1-205ENST00000393357 SCGB2A1O75556 95 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 TEX29Q8N6K0 151 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 UBTD1Q9HAC8 227 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
PHTF1-205ENST00000393357 TMEM238LA0A1B0GVL6 79 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 A6NJY4 79 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 RNASE13Q5GAN3 156 aaKnown RBP12.49□□□□□ -0.41
PHTF1-205ENST00000393357 VPS13CQ709C8 3753 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 WNK1Q9H4A3 2382 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
PHTF1-205ENST00000393357 ZNF580Q9UK33 172 aa12.48□□□□□ -0.41
PHTF1-205ENST00000393357 KAAG1Q9UBP8 84 aa12.48□□□□□ -0.41
PHTF1-205ENST00000393357 TSPEAR-AS2P59090 65 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 PTPN13Q12923 2485 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 MYO9AB2RTY4 2548 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 IGHV7-81A0A0B4J1V7 117 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 NTN5Q8WTR8 489 aaPredicted RBP12.47□□□□□ -0.41
PHTF1-205ENST00000393357 SONP18583 2426 aaKnown RBP12.47□□□□□ -0.41
PHTF1-205ENST00000393357 VMO1Q7Z5L0 202 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 C8orf31Q8N9H6 132 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 OR11H6Q8NGC7 330 aa12.47□□□□□ -0.41
PHTF1-205ENST00000393357 CRLF1O75462 422 aa12.46□□□□□ -0.41
PHTF1-205ENST00000393357 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
PHTF1-205ENST00000393357 Q6ZS92 163 aa12.46□□□□□ -0.41
PHTF1-205ENST00000393357 ZNF48Q96MX3 618 aaPredicted RBP12.46□□□□□ -0.41
PHTF1-205ENST00000393357 METTL26Q96S19 204 aa12.46□□□□□ -0.41
PHTF1-205ENST00000393357 A0A0U1RRA0 63 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 TCF15Q12870 199 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 NDUFA11Q86Y39 141 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 NEXN-AS1Q8NBZ9 246 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 AJUBAQ96IF1 538 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 C20orf173Q96LM9 149 aa12.46□□□□□ -0.42
PHTF1-205ENST00000393357 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 CFC1BP0CG36 223 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 CFC1P0CG37 223 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 TLN2Q9Y4G6 2542 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 TCTEX1D4Q5JR98 221 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 Q6ZSV7 163 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 TEN1Q86WV5 123 aa12.45□□□□□ -0.42
PHTF1-205ENST00000393357 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 A4D1N5 150 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 TAL2Q16559 108 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 SLC25A20O43772 301 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 ELANEP08246 267 aa12.44□□□□□ -0.42
PHTF1-205ENST00000393357 TEX49A0A1B0GTD5 131 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 ZNF688P0C7X2 276 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 LGALS3P17931 250 aaKnown RBP12.43□□□□□ -0.42
PHTF1-205ENST00000393357 ASIPP42127 132 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 POLQO75417 2590 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 SNCGO76070 127 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 LY6EQ16553 131 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 TTC32Q5I0X7 151 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 PIFOQ8TCI5 191 aa12.43□□□□□ -0.42
PHTF1-205ENST00000393357 B9A039 149 aa12.42□□□□□ -0.42
PHTF1-205ENST00000393357 CCDC179H3BU77 68 aa12.42□□□□□ -0.42
PHTF1-205ENST00000393357 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
PHTF1-205ENST00000393357 CNFNQ9BYD5 112 aa12.42□□□□□ -0.42
PHTF1-205ENST00000393357 SPTBN4Q9H254 2564 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 A0A0J9YY99 117 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 CLPSL1A2RUU4 121 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 GAGE2BQ13066 116 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 GAGE2EQ4V326 116 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 TOMM6Q96B49 74 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 GAGE2DQ9UEU5 116 aa12.41□□□□□ -0.42
PHTF1-205ENST00000393357 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms