RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
ERCC2-201ENST00000391941 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 LINC01549A6NIU2 74 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 OOSP1A8MZH6 123 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 PLNP26678 52 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 AJUBAQ96IF1 538 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 METTL26Q96S19 204 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
ERCC2-201ENST00000391941 RAXQ9Y2V3 346 aa13.67□□□□□ -0.22
ERCC2-201ENST00000391941 DUSP14O95147 198 aaKnown RBP13.66□□□□□ -0.22
ERCC2-201ENST00000391941 CSPG4Q6UVK1 2322 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 ZNF815PA8K554 130 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 H7C1H1 209 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 SUMO2P61956 95 aaKnown RBP13.66□□□□□ -0.22
ERCC2-201ENST00000391941 ANXA2RQ3ZCQ2 193 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 PRO0461Q9UI25 63 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 MUC4Q99102 2169 aa13.66□□□□□ -0.22
ERCC2-201ENST00000391941 RPL39P62891 51 aaKnown RBP13.65□□□□□ -0.22
ERCC2-201ENST00000391941 C2orf66Q6UXQ4 117 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 PSMB2P49721 201 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 SMCPP49901 116 aaPredicted RBP13.65□□□□□ -0.22
ERCC2-201ENST00000391941 BRD3OSQ6XYD6 125 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 C9orf47Q6ZRZ4 202 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 UBTD1Q9HAC8 227 aa13.65□□□□□ -0.22
ERCC2-201ENST00000391941 ZANQ9Y493 2812 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 IGHV4-4A0A075B6R2 117 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 RNF223E7ERA6 249 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 F8W1H4 67 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 TAL2Q16559 108 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 PHLDA3Q9Y5J5 127 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 A0A087WWL8 130 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 TCF15Q12870 199 aa13.64□□□□□ -0.23
ERCC2-201ENST00000391941 SRSF9Q13242 221 aaKnown RBP eCLIP13.64□□□□□ -0.23
ERCC2-201ENST00000391941 PF4V1P10720 104 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 C11orf71Q6IPW1 123 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 NFE4Q86UQ8 179 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 FHL3Q13643 280 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 Q6ZS46 218 aa13.63□□□□□ -0.23
ERCC2-201ENST00000391941 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
ERCC2-201ENST00000391941 FBXL19-AS1Q494R0 122 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 EEF1AKMT3Q96AZ1 226 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 CENPEQ02224 2701 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 ADORA2A-AS1P86434 159 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
ERCC2-201ENST00000391941 IGHV3-64A0A075B6Q5 118 aa13.61□□□□□ -0.23
ERCC2-201ENST00000391941 OPRPNQ99935 248 aaPredicted RBP13.61□□□□□ -0.23
ERCC2-201ENST00000391941 ABCA2Q9BZC7 2435 aa13.61□□□□□ -0.23
ERCC2-201ENST00000391941 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
ERCC2-201ENST00000391941 LY6EQ16553 131 aa13.61□□□□□ -0.23
ERCC2-201ENST00000391941 MRPL53Q96EL3 112 aaKnown RBP13.61□□□□□ -0.23
ERCC2-201ENST00000391941 C11orf86A6NJI1 115 aa13.61□□□□□ -0.23
ERCC2-201ENST00000391941 IGKV3-20P01619 116 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 CRYGDP07320 174 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 TSPEAR-AS2P59090 65 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 SYT8Q8NBV8 401 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 U3KQE9 123 aa13.6□□□□□ -0.23
ERCC2-201ENST00000391941 ITPR1Q14643 2758 aa13.59□□□□□ -0.23
ERCC2-201ENST00000391941 TSHBP01222 138 aa13.59□□□□□ -0.23
ERCC2-201ENST00000391941 ORMDL2Q53FV1 153 aa13.59□□□□□ -0.23
ERCC2-201ENST00000391941 BPESC1Q9GZL8 116 aa13.59□□□□□ -0.23
ERCC2-201ENST00000391941 FAM74A4Q5TZK3 123 aa13.59□□□□□ -0.23
ERCC2-201ENST00000391941 TRBV7-1A0A0A6YYK4 115 aa13.58□□□□□ -0.23
ERCC2-201ENST00000391941 H7C2G1 150 aa13.58□□□□□ -0.23
ERCC2-201ENST00000391941 TSPAN13O95857 204 aa13.58□□□□□ -0.23
ERCC2-201ENST00000391941 KLK9Q2XQG4 91 aa13.58□□□□□ -0.24
ERCC2-201ENST00000391941 KLK9Q9UKQ9 250 aa13.58□□□□□ -0.24
ERCC2-201ENST00000391941 TP53TG1Q9Y2A0 90 aa13.58□□□□□ -0.24
ERCC2-201ENST00000391941 CENPVL3A0A0U1RRI6 287 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 UBE2E1P51965 193 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 F5H697 171 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
ERCC2-201ENST00000391941 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
ERCC2-201ENST00000391941 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 J3QR89 54 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 K7ENP7 123 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 ASIPP42127 132 aa13.57□□□□□ -0.24
ERCC2-201ENST00000391941 DPH3P1Q9H4G8 78 aa13.56□□□□□ -0.24
ERCC2-201ENST00000391941 MT-ATP8P03928 68 aa13.56□□□□□ -0.24
ERCC2-201ENST00000391941 TMEM170BQ5T4T1 132 aa13.56□□□□□ -0.24
ERCC2-201ENST00000391941 C5orf56Q8N8D9 126 aa13.56□□□□□ -0.24
ERCC2-201ENST00000391941 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
ERCC2-201ENST00000391941 C9orf139Q6ZV77 190 aa13.55□□□□□ -0.24
ERCC2-201ENST00000391941 OR10J6PQ8NGY7 276 aa13.55□□□□□ -0.24
ERCC2-201ENST00000391941 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
ERCC2-201ENST00000391941 RAX2Q96IS3 184 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 IGLV4-69A0A075B6H9 119 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 FOXI1Q12951 378 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
ERCC2-201ENST00000391941 LINC01619G3V211 115 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms