RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 IGHV3-53P01767 116 aa15.4■□□□□ 0.06
SHANK1-203ENST00000391813 MED13LQ71F56 2210 aa15.4■□□□□ 0.06
SHANK1-203ENST00000391813 HAMPP81172 84 aa15.4■□□□□ 0.06
SHANK1-203ENST00000391813 KNCNA6PVL3 124 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 HTN3P15516 51 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 C3orf56Q8N813 242 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 PIFOQ8TCI5 191 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 MSRB1Q9NZV6 116 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 G3V318 75 aa15.39■□□□□ 0.05
SHANK1-203ENST00000391813 DEFB131AP59861 70 aa15.38■□□□□ 0.05
SHANK1-203ENST00000391813 I3L2K1 104 aa15.38■□□□□ 0.05
SHANK1-203ENST00000391813 NSUN5P1Q3KNT7 163 aa15.38■□□□□ 0.05
SHANK1-203ENST00000391813 TNRC6AQ8NDV7 1962 aaKnown RBP15.38■□□□□ 0.05
SHANK1-203ENST00000391813 NCOR2Q9Y618 2525 aa15.38■□□□□ 0.05
SHANK1-203ENST00000391813 PLXNB3Q9ULL4 1909 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 TRBV10-2A0A0K0K1G8 114 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 IGLV2-8P01709 118 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 TMEM258P61165 79 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 SPG11Q96JI7 2443 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 A0A0B4J2C4 111 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 FAM236AA0A1B0GUQ0 79 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 FAM236BA0A1B0GV22 79 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 LHBP01229 141 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 FOXE3Q13461 319 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 PRORYQ9H606 182 aa15.37■□□□□ 0.05
SHANK1-203ENST00000391813 DAZAP2Q15038 168 aaPredicted RBP15.36■□□□□ 0.05
SHANK1-203ENST00000391813 KLHL30-AS1Q8NEE0 82 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 PRB1P04280 392 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 TP53TG3Q9ULZ0 132 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 MUSTN1Q8IVN3 82 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 ZNF295-AS1Q8N0V1 137 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 KLK9Q9UKQ9 250 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 ICOSQ9Y6W8 199 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 C11orf44Q8N8P7 122 aa15.36■□□□□ 0.05
SHANK1-203ENST00000391813 NCOA6Q14686 2063 aaPredicted RBP15.36■□□□□ 0.05
SHANK1-203ENST00000391813 K7EIM0 57 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 PFN2P35080 140 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 Q6ZUT4 128 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 TMEM243Q9BU79 118 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 COL4A4P53420 1690 aaPredicted RBP15.35■□□□□ 0.05
SHANK1-203ENST00000391813 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 MBD6Q96DN6 1003 aa15.35■□□□□ 0.05
SHANK1-203ENST00000391813 MED13Q9UHV7 2174 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 ANKHD1Q8IWZ3 2542 aaKnown RBP15.34■□□□□ 0.05
SHANK1-203ENST00000391813 HERV-K104P63124 156 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 FBXL19-AS1Q494R0 122 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 ZNF503Q96F45 646 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 DEFB113Q30KQ7 82 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 TM2D2Q9BX73 214 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
SHANK1-203ENST00000391813 ATP5G1P05496 136 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 ZFP2Q6ZN57 461 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 COL4A3Q01955 1670 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 TOMM6Q96B49 74 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 TIMM17AQ99595 171 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 DPH3Q96FX2 82 aa15.33■□□□□ 0.04
SHANK1-203ENST00000391813 ZNRF2Q8NHG8 242 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 SPANXB1Q9NS25 103 aaPredicted RBP15.32■□□□□ 0.04
SHANK1-203ENST00000391813 RBM3P98179 157 aaKnown RBP15.32■□□□□ 0.04
SHANK1-203ENST00000391813 ADORA2A-AS1P86434 159 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 IGFBPL1Q8WX77 278 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 UBE2E2Q96LR5 201 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 H0YGX0 51 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 CRLF1O75462 422 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 Q71RC1 249 aaPredicted RBP15.32■□□□□ 0.04
SHANK1-203ENST00000391813 RPL39LQ96EH5 51 aaKnown RBP15.32■□□□□ 0.04
SHANK1-203ENST00000391813 DSCR8Q96T75 97 aa15.32■□□□□ 0.04
SHANK1-203ENST00000391813 IGHV7-4-1A0A0J9YVY3 117 aa15.31■□□□□ 0.04
SHANK1-203ENST00000391813 RNF183Q96D59 192 aa15.31■□□□□ 0.04
SHANK1-203ENST00000391813 Q9H8V8 135 aa15.31■□□□□ 0.04
SHANK1-203ENST00000391813 GNRH2O43555 120 aa15.31■□□□□ 0.04
SHANK1-203ENST00000391813 GDF5OSQ5U4N7 250 aa15.31■□□□□ 0.04
SHANK1-203ENST00000391813 TINCRA0A1B0GVN0 87 aa15.3■□□□□ 0.04
SHANK1-203ENST00000391813 BAALCQ8WXS3 180 aa15.3■□□□□ 0.04
SHANK1-203ENST00000391813 GRNP28799 593 aaKnown RBP15.3■□□□□ 0.04
SHANK1-203ENST00000391813 MLST8Q9BVC4 326 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 ORMDL1Q9P0S3 153 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 C11orf86A6NJI1 115 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 ALPK3Q96L96 1907 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 IGLV11-55A0A075B6I3 123 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 A0A0J9YXV3 536 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 A0A1B0GX51 115 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 F8WEM9 126 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 CRYGCP07315 174 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 MAPK1IP1LQ8NDC0 245 aa15.29■□□□□ 0.04
SHANK1-203ENST00000391813 TRAV12-2A0A075B6T6 113 aa15.28■□□□□ 0.04
SHANK1-203ENST00000391813 H3BUA1 57 aa15.28■□□□□ 0.04
SHANK1-203ENST00000391813 NDUFA11Q86Y39 141 aa15.28■□□□□ 0.04
SHANK1-203ENST00000391813 IGHV3-16A0A0C4DH30 117 aa15.28■□□□□ 0.04
SHANK1-203ENST00000391813 PTH2Q96A98 100 aa15.28■□□□□ 0.04
SHANK1-203ENST00000391813 MED14OSP0DP75 135 aa15.27■□□□□ 0.04
SHANK1-203ENST00000391813 IGHV3-38A0A0C4DH36 116 aa15.27■□□□□ 0.04
SHANK1-203ENST00000391813 WI2-2373I1.2A0A1W2PRP0 233 aa15.27■□□□□ 0.04
SHANK1-203ENST00000391813 Q8NA96 180 aa15.27■□□□□ 0.04
SHANK1-203ENST00000391813 NDUFV3P56181 108 aaKnown RBP15.27■□□□□ 0.03
SHANK1-203ENST00000391813 Q6ZPA2 131 aa15.27■□□□□ 0.03
SHANK1-203ENST00000391813 CTSZQ9UBR2 303 aa15.27■□□□□ 0.03
SHANK1-203ENST00000391813 BUB3O43684 328 aa15.26■□□□□ 0.03
SHANK1-203ENST00000391813 RUSC1-AS1Q66K80 236 aa15.26■□□□□ 0.03
SHANK1-203ENST00000391813 SUMO4Q6EEV6 95 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms