RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 MAP1LC3AQ9H492 121 aa11.18□□□□□ -0.62
SNX2-201ENST00000379516 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
SNX2-201ENST00000379516 PAM16Q9Y3D7 125 aa11.18□□□□□ -0.62
SNX2-201ENST00000379516 CD7P09564 240 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 NOTCH2Q04721 2471 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 TRAV26-2A0A0B4J265 109 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
SNX2-201ENST00000379516 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
SNX2-201ENST00000379516 ZNF124Q15973 351 aa11.16□□□□□ -0.62
SNX2-201ENST00000379516 KIR2DL5BA0A0G2JN68 375 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 KIR2DL5BA0A0G2JPC4 375 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 NDUFA7O95182 113 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 HLA-DRB4P13762 266 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 FXYD7P58549 80 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 KIR2DL5AQ8N109 375 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 C14orf178Q8N769 122 aaPredicted RBP11.15□□□□□ -0.62
SNX2-201ENST00000379516 OR2K2Q8NGT1 345 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 MAP1LC3CQ9BXW4 147 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 HLA-DRB4X5D2U9 266 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 OTOGQ6ZRI0 2925 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 OR4C46A6NHA9 309 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 ATOH7Q8N100 152 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 MAP6D1Q9H9H5 199 aa11.15□□□□□ -0.62
SNX2-201ENST00000379516 A0A096LNJ9 63 aa11.14□□□□□ -0.63
SNX2-201ENST00000379516 H3BMM0 161 aa11.14□□□□□ -0.63
SNX2-201ENST00000379516 DEFA6Q01524 100 aa11.14□□□□□ -0.63
SNX2-201ENST00000379516 SPAG8Q99932 426 aaPredicted RBP11.14□□□□□ -0.63
SNX2-201ENST00000379516 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
SNX2-201ENST00000379516 IGHV1OR15-1A0A075B7D0 117 aa11.14□□□□□ -0.63
SNX2-201ENST00000379516 CRXO43186 299 aaPredicted RBP11.14□□□□□ -0.63
SNX2-201ENST00000379516 INAFM1C9JVW0 142 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 H0Y8G0 127 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 PROK1P58294 105 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 NRACQ8N912 160 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
SNX2-201ENST00000379516 NXT2Q9NPJ8 142 aaKnown RBP11.13□□□□□ -0.63
SNX2-201ENST00000379516 ZNF256Q9Y2P7 627 aaPredicted RBP11.13□□□□□ -0.63
SNX2-201ENST00000379516 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 NSUN5P1Q3KNT7 163 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 Q8N1Y9 231 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 ZNF747Q9BV97 191 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 AGRNO00468 2067 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 NXPH4O95158 308 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 HBDP02042 147 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 MGPP08493 103 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 SORL1Q92673 2214 aa11.12□□□□□ -0.63
SNX2-201ENST00000379516 C20orf202A1L168 122 aa11.11□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
SNX2-201ENST00000379516 A8MTW9 85 aa11.11□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
SNX2-201ENST00000379516 SETD2Q9BYW2 2564 aaPredicted RBP11.11□□□□□ -0.63
SNX2-201ENST00000379516 PET117Q6UWS5 81 aa11.11□□□□□ -0.63
SNX2-201ENST00000379516 Q8N8P6 123 aa11.11□□□□□ -0.63
SNX2-201ENST00000379516 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 SMIM17P0DL12 118 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
SNX2-201ENST00000379516 MAJINQ3KP22 176 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 ZNF705AQ6ZN79 300 aaPredicted RBP11.1□□□□□ -0.63
SNX2-201ENST00000379516 C14orf144Q96I85 54 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
SNX2-201ENST00000379516 MCRIP2Q9BUT9 160 aaKnown RBP11.1□□□□□ -0.63
SNX2-201ENST00000379516 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 JPT2Q9H910 190 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 IGLV2-18A0A075B6J9 118 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 CBY3A6NI87 242 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 PRSS47A8MTI9 375 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 SAP30O75446 220 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 HTN1P15515 57 aa11.09□□□□□ -0.63
SNX2-201ENST00000379516 TRAV9-2A0A087WT02 112 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 ODF3L2Q3SX64 289 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 RASL10AQ92737 203 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 KIF25-AS1Q9Y6Z4 181 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 FCER1GP30273 86 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
SNX2-201ENST00000379516 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
SNX2-201ENST00000379516 A0A087WWL8 130 aa11.07□□□□□ -0.64
SNX2-201ENST00000379516 KRTAP10-3P60369 221 aa11.07□□□□□ -0.64
SNX2-201ENST00000379516 MIEN1Q9BRT3 115 aa11.07□□□□□ -0.64
SNX2-201ENST00000379516 MUC4Q99102 2169 aa11.07□□□□□ -0.64
SNX2-201ENST00000379516 TCAPO15273 167 aa11.06□□□□□ -0.64
SNX2-201ENST00000379516 LINC00315P59091 139 aa11.06□□□□□ -0.64
SNX2-201ENST00000379516 LINC01545Q5VT33 79 aa11.06□□□□□ -0.64
SNX2-201ENST00000379516 POM121L12Q8N7R1 296 aa11.06□□□□□ -0.64
SNX2-201ENST00000379516 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
SNX2-201ENST00000379516 OR11H12B2RN74 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms