RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SMCPP49901 116 aaPredicted RBP12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 GAGE5Q13069 117 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 GAGE6Q13070 117 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 CDIP1Q9H305 208 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 UBTD1Q9HAC8 227 aa12.66□□□□□ -0.38
PCDHA1-201ENST00000378133 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 SFTA2Q6UW10 78 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 ATP6V0E2Q8NHE4 81 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 CELSR1Q9NYQ6 3014 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 LOC107984156A0A0G2JMH3 177 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 PSMB2P49721 201 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 NFE4Q86UQ8 179 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 ARL17AQ8IVW1 177 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 EEF1AKMT3Q96AZ1 226 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 METTL26Q96S19 204 aa12.65□□□□□ -0.38
PCDHA1-201ENST00000378133 CENPVL3A0A0U1RRI6 287 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 RPL32P62910 135 aaKnown RBP12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 LINC00527Q9UJ94 153 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 BPESC1Q9GZL8 116 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 KLK9Q9UKQ9 250 aa12.64□□□□□ -0.39
PCDHA1-201ENST00000378133 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 TMEM219Q86XT9 240 aa12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 ORMDL2Q53FV1 153 aa12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 SCGB1D4Q6XE38 83 aa12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
PCDHA1-201ENST00000378133 ZNF815PA8K554 130 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 LMO4P61968 165 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 ZFP2Q6ZN57 461 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 TOMM6Q96B49 74 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 ANAPC13Q9BS18 74 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 TRBV7-1A0A0A6YYK4 115 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
PCDHA1-201ENST00000378133 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 J3KRW8 73 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 NPFFO15130 113 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 XGP55808 180 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 GLMPQ8WWB7 406 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 IGHV3OR16-10A0A075B7F0 116 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 H3BVH4 76 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 C5orf56Q8N8D9 126 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 PTH2Q96A98 100 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 FHL3Q13643 280 aa12.61□□□□□ -0.39
PCDHA1-201ENST00000378133 VPS13CQ709C8 3753 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 C16orf92Q96LL3 132 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 SLC25A16P16260 332 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 UBE2D1P51668 147 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 C9orf47Q6ZRZ4 202 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 Q6ZUT4 128 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 U3KQE9 123 aa12.6□□□□□ -0.39
PCDHA1-201ENST00000378133 IGF1P05019 195 aa12.59□□□□□ -0.39
PCDHA1-201ENST00000378133 BAALCQ8WXS3 180 aa12.59□□□□□ -0.39
PCDHA1-201ENST00000378133 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
PCDHA1-201ENST00000378133 ID1P41134 155 aa12.59□□□□□ -0.39
PCDHA1-201ENST00000378133 PRR9Q5T870 116 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 C2orf66Q6UXQ4 117 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 KLHL30-AS1Q8NEE0 82 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 RASL10AQ92737 203 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 C20orf173Q96LM9 149 aa12.58□□□□□ -0.4
PCDHA1-201ENST00000378133 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 SPRY2O43597 315 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 UBE2D3P61077 147 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 UBE2D2P62837 147 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 CARD19Q96LW7 228 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 ACACBO00763 2458 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 M0R381 172 aa12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
PCDHA1-201ENST00000378133 LYRM7Q5U5X0 104 aa12.56□□□□□ -0.4
PCDHA1-201ENST00000378133 TEN1Q86WV5 123 aa12.56□□□□□ -0.4
PCDHA1-201ENST00000378133 UNQ9165/PRO28630Q6UXU0 137 aa12.56□□□□□ -0.4
PCDHA1-201ENST00000378133 TRBV12-3P01733 135 aa12.55□□□□□ -0.4
PCDHA1-201ENST00000378133 CD7P09564 240 aa12.55□□□□□ -0.4
PCDHA1-201ENST00000378133 COX6B1P14854 86 aa12.55□□□□□ -0.4
PCDHA1-201ENST00000378133 DEFB1P60022 68 aa12.55□□□□□ -0.4
PCDHA1-201ENST00000378133 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
PCDHA1-201ENST00000378133 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 ARL3P36405 182 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 NDUFA11Q86Y39 141 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 TCL1BO95988 128 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 GNLYP22749 145 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 COL12A1Q99715 3063 aa12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
PCDHA1-201ENST00000378133 VCX2Q9H322 139 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 IGSF10Q6WRI0 2623 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 DPH3P1Q9H4G8 78 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 A8MWV9 139 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms