RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 IGKV3D-20A0A0C4DH25 116 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 TRBV6-1A0A0K0K1D8 114 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 A0A1B0GV50 99 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 B4DEV8 164 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 RS1O15537 224 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 PAGE4O60829 102 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 TNP2Q05952 138 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 FAM162BQ5T6X4 162 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 CFAP126Q5VTH2 177 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 COX8CQ7Z4L0 72 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 ZC2HC1AQ96GY0 325 aa11.54□□□□□ -0.56
HMGN4-201ENST00000377575 LTAP01374 205 aa11.53□□□□□ -0.56
HMGN4-201ENST00000377575 LGALSLQ3ZCW2 172 aaPredicted RBP11.53□□□□□ -0.56
HMGN4-201ENST00000377575 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
HMGN4-201ENST00000377575 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
HMGN4-201ENST00000377575 PGPEP1LA6NFU8 196 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 SH2D1AO60880 128 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
HMGN4-201ENST00000377575 RHOHQ15669 191 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 PIK3CD-AS1Q5SR53 167 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 EIF5AL1Q6IS14 154 aaKnown RBP11.52□□□□□ -0.57
HMGN4-201ENST00000377575 NHLRC2Q8NBF2 726 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 IL36BQ9NZH7 164 aa11.52□□□□□ -0.57
HMGN4-201ENST00000377575 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
HMGN4-201ENST00000377575 A8MWV9 139 aa11.51□□□□□ -0.57
HMGN4-201ENST00000377575 TRAV9-2A0A087WT02 112 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 LOC100131303A0A0U1RQF7 123 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 KRBOX1C9JBD0 128 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 H3BVH4 76 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 M0R036 132 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 MED14OSP0DP75 135 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 MGST1P10620 155 aaKnown RBP11.5□□□□□ -0.57
HMGN4-201ENST00000377575 RAB5CP51148 216 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 LINC00315P59091 139 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 ZNF674Q2M3X9 581 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 DNLZQ5SXM8 178 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 SLC25A29Q8N8R3 303 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 MANBALQ9NQG1 85 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
HMGN4-201ENST00000377575 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 IGHV3-73A0A0B4J1V6 119 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 K7EP13 123 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 CRIP1P50238 77 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
HMGN4-201ENST00000377575 TEX46H3BTG2 121 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 C1QBP02746 253 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 TIRAPP58753 221 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 PARLQ9H300 379 aa11.48□□□□□ -0.57
HMGN4-201ENST00000377575 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
HMGN4-201ENST00000377575 EVI2AP22794 236 aa11.47□□□□□ -0.57
HMGN4-201ENST00000377575 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
HMGN4-201ENST00000377575 PHLDA3Q9Y5J5 127 aa11.47□□□□□ -0.57
HMGN4-201ENST00000377575 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
HMGN4-201ENST00000377575 TRAV1-1A0A0B4J248 108 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 C16orf90A8MZG2 172 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 RHODO00212 210 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 DNAH10OSP0CZ25 163 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 Q6ZNX1 250 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 NFE4Q86UQ8 179 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
HMGN4-201ENST00000377575 HERC2O95714 4834 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 TMSB15BA0A087X1C1 80 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 GRIFINA4D1Z8 144 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 SULT1A2P50226 295 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 BAGE2Q86Y30 109 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
HMGN4-201ENST00000377575 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
HMGN4-201ENST00000377575 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
HMGN4-201ENST00000377575 AKAP14Q86UN6 197 aa11.44□□□□□ -0.58
HMGN4-201ENST00000377575 ZFP82Q8N141 532 aa11.44□□□□□ -0.58
HMGN4-201ENST00000377575 SCRT2Q9NQ03 307 aa11.44□□□□□ -0.58
HMGN4-201ENST00000377575 KIAA1109Q2LD37 5005 aa11.44□□□□□ -0.58
HMGN4-201ENST00000377575 CRYGDP07320 174 aa11.43□□□□□ -0.58
HMGN4-201ENST00000377575 OR10J3Q5JRS4 329 aa11.43□□□□□ -0.58
HMGN4-201ENST00000377575 C11orf52Q96A22 123 aa11.43□□□□□ -0.58
HMGN4-201ENST00000377575 MLST8Q9BVC4 326 aa11.43□□□□□ -0.58
HMGN4-201ENST00000377575 MSRB1Q9NZV6 116 aa11.43□□□□□ -0.58
HMGN4-201ENST00000377575 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 M0R381 172 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 IFNA1P01562 189 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 CXCL1P09341 107 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 RPL35P42766 123 aaKnown RBP11.42□□□□□ -0.58
HMGN4-201ENST00000377575 CCL20P78556 96 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 LELP1Q5T871 98 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 FAM74A4Q5TZK3 123 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 UFSP1Q6NVU6 142 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 ATP6V0E2Q8NHE4 81 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 GTSF1LQ9H1H1 148 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 JPT2Q9H910 190 aa11.42□□□□□ -0.58
HMGN4-201ENST00000377575 EREGO14944 169 aa11.41□□□□□ -0.58
HMGN4-201ENST00000377575 ERVFC1-1P60608 527 aa11.41□□□□□ -0.58
HMGN4-201ENST00000377575 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
HMGN4-201ENST00000377575 PRR27Q6MZM9 219 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms