RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CSN3P07498 182 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
VRK3-202ENST00000377011 GPR183P32249 361 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 ZNF138P52744 262 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 LINC01559Q495D7 138 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 SIGLEC8Q9NYZ4 499 aa9.33□□□□□ -0.92
VRK3-202ENST00000377011 SIVA1O15304 175 aa9.32□□□□□ -0.92
VRK3-202ENST00000377011 MRPL51Q4U2R6 128 aaKnown RBP9.32□□□□□ -0.92
VRK3-202ENST00000377011 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
VRK3-202ENST00000377011 FABP5P3A8MUU1 101 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 IGHV3-23P01764 117 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 HBDP02042 147 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 IFI27P40305 119 aaPredicted RBP9.31□□□□□ -0.92
VRK3-202ENST00000377011 RBX1P62877 108 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 EGFEM1PQ0D2K5 195 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 ASCL2Q99929 193 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 PEF1Q9UBV8 284 aaKnown RBP9.31□□□□□ -0.92
VRK3-202ENST00000377011 A0A096LNJ9 63 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 TRBV7-1A0A0A6YYK4 115 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 TMEM213A2RRL7 107 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 BUB3O43684 328 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 EDN2P20800 178 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 C15orf32Q32M92 178 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 AMN1Q8IY45 258 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 EEF1AKMT3Q96AZ1 226 aa9.31□□□□□ -0.92
VRK3-202ENST00000377011 MUC21A0A0G2JKD1 596 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 MUC21A0A140T8X8 626 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 LINC01619G3V211 115 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 PCP4P48539 62 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 OR9G4Q8NGQ1 327 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
VRK3-202ENST00000377011 VGLL1Q99990 258 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 SORL1Q92673 2214 aa9.3□□□□□ -0.92
VRK3-202ENST00000377011 CKS2P33552 79 aa9.29□□□□□ -0.92
VRK3-202ENST00000377011 TWIST1Q15672 202 aa9.29□□□□□ -0.92
VRK3-202ENST00000377011 TMEM97Q5BJF2 176 aa9.29□□□□□ -0.92
VRK3-202ENST00000377011 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.29□□□□□ -0.92
VRK3-202ENST00000377011 Q6ZVH6 145 aa9.29□□□□□ -0.92
VRK3-202ENST00000377011 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 A6NDN8 102 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 H3BUA1 57 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
VRK3-202ENST00000377011 C2orf91Q6ZV80 131 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 MRAPQ8TCY5 172 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 MAP1LC3AQ9H492 121 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 NXT2Q9NPJ8 142 aaKnown RBP9.28□□□□□ -0.92
VRK3-202ENST00000377011 OVOL1O14753 267 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 BRI3O95415 125 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 BOD1L2Q8IYS8 172 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 Q8TAT8 98 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 METTL26Q96S19 204 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 SELENOKQ9Y6D0 94 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 U3KQE9 123 aa9.28□□□□□ -0.92
VRK3-202ENST00000377011 FAM223BA6NKX1 122 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 ORM1P02763 201 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 CLEC3BP05452 202 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 ZNF575Q86XF7 245 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 FAM223AQ8IWN6 122 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 RNF185Q96GF1 192 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 CCDC140Q96MF4 163 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 LENEPQ9Y5L5 61 aa9.27□□□□□ -0.93
VRK3-202ENST00000377011 H0Y8G0 127 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 H3BRM9 83 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 NPYP01303 97 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 FGF6P10767 208 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 AMMECR1LQ6DCA0 310 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 IFI27L1Q96BM0 104 aa9.26□□□□□ -0.93
VRK3-202ENST00000377011 TENM3Q9P273 2699 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 LOC389332A0A1B0GUA5 103 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 C7orf71A4D174 169 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 NCR2O95944 276 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 SYNJ2BPP57105 145 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 HSD52Q0P140 79 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 C9orf47Q6ZRZ4 202 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 IGHV4-4A0A075B6R2 117 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 CBY3A6NI87 242 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 SAP30O75446 220 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 HLA-DMBP28068 263 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 FCER1GP30273 86 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 ATP5G2Q06055 141 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 FAM106AQ4KMX7 169 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 TMEM78Q5T7P6 136 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 C9orf66Q5T8R8 295 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 MCRIP2Q9BUT9 160 aaKnown RBP9.25□□□□□ -0.93
VRK3-202ENST00000377011 CST9LQ9H4G1 147 aa9.25□□□□□ -0.93
VRK3-202ENST00000377011 A0A0G2JLM5 398 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 CACNG7P62955 275 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 CLEC19AQ6UXS0 136 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 SMIM15Q7Z3B0 74 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 USMG5Q96IX5 58 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 AP1S3Q96PC3 154 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 SMPXQ9UHP9 88 aa9.24□□□□□ -0.93
VRK3-202ENST00000377011 TIMM8BQ9Y5J9 83 aaPredicted RBP9.24□□□□□ -0.93
VRK3-202ENST00000377011 TRAV8-2A0A0B4J237 113 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms