RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MRAP2Q96G30 205 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 MYO9AB2RTY4 2548 aa15.15■□□□□ 0.02
VSX1-202ENST00000376709 FAM159AQ6UWV7 190 aa15.15■□□□□ 0.02
VSX1-202ENST00000376709 IGLV2-18A0A075B6J9 118 aa15.14■□□□□ 0.01
VSX1-202ENST00000376709 K7EQG2 157 aa15.14■□□□□ 0.01
VSX1-202ENST00000376709 RNASE3P12724 160 aaKnown RBP15.14■□□□□ 0.01
VSX1-202ENST00000376709 C14orf178Q8N769 122 aaPredicted RBP15.14■□□□□ 0.01
VSX1-202ENST00000376709 DPH3P1Q9H4G8 78 aa15.14■□□□□ 0.01
VSX1-202ENST00000376709 DLEU1O43261 78 aa15.13■□□□□ 0.01
VSX1-202ENST00000376709 Q8N2B8 174 aa15.13■□□□□ 0.01
VSX1-202ENST00000376709 TMEM158Q8WZ71 300 aa15.13■□□□□ 0.01
VSX1-202ENST00000376709 UNC79Q9P2D8 2635 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 TRAV12-3A0A0B4J271 114 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 IGKV3-20P01619 116 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 DEFB136Q30KP8 78 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 GCN1Q92616 2671 aaKnown RBP15.12■□□□□ 0.01
VSX1-202ENST00000376709 A0A0J9YX75 114 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 PRSS47A8MTI9 375 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 DEFB125Q8N687 156 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 AP1S3Q96PC3 154 aa15.12■□□□□ 0.01
VSX1-202ENST00000376709 SONP18583 2426 aaKnown RBP15.12■□□□□ 0.01
VSX1-202ENST00000376709 LAGE3Q14657 143 aa15.11■□□□□ 0.01
VSX1-202ENST00000376709 C7orf71A4D174 169 aa15.11■□□□□ 0.01
VSX1-202ENST00000376709 MGPP08493 103 aa15.11■□□□□ 0.01
VSX1-202ENST00000376709 C18orf65Q6ZTR6 163 aa15.11■□□□□ 0.01
VSX1-202ENST00000376709 SLURP1P55000 103 aa15.1■□□□□ 0.01
VSX1-202ENST00000376709 MPV17L2Q567V2 206 aa15.1■□□□□ 0.01
VSX1-202ENST00000376709 TCTEX1D4Q5JR98 221 aa15.1■□□□□ 0.01
VSX1-202ENST00000376709 ODF3Q96PU9 254 aa15.1■□□□□ 0.01
VSX1-202ENST00000376709 CD5LO43866 347 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 CD7P09564 240 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 NPSP0C0P6 89 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 KHDC1LQ5JSQ8 128 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 Q6ZVH6 145 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 ANKRD39Q53RE8 183 aa15.09■□□□□ 0.01
VSX1-202ENST00000376709 TRAV12-2A0A075B6T6 113 aa15.08■□□□□ 0.01
VSX1-202ENST00000376709 PRSS1P07477 247 aa15.08■□□□□ 0.01
VSX1-202ENST00000376709 SMIM17P0DL12 118 aa15.08■□□□□ 0.01
VSX1-202ENST00000376709 SMIM2Q9BVW6 85 aa15.08■□□□□ 0.01
VSX1-202ENST00000376709 MUC4Q99102 2169 aa15.08■□□□□ 0
VSX1-202ENST00000376709 COX8AP10176 69 aa15.08■□□□□ 0
VSX1-202ENST00000376709 TCTAP57738 103 aa15.08■□□□□ 0
VSX1-202ENST00000376709 DPF1Q92782 380 aa15.08■□□□□ 0
VSX1-202ENST00000376709 DKK2Q9UBU2 259 aa15.08■□□□□ 0
VSX1-202ENST00000376709 SUMO2P61956 95 aaKnown RBP15.07■□□□□ 0
VSX1-202ENST00000376709 GAGE1Q13065 139 aa15.07■□□□□ 0
VSX1-202ENST00000376709 TEX29Q8N6K0 151 aa15.07■□□□□ 0
VSX1-202ENST00000376709 RASL10AQ92737 203 aa15.07■□□□□ 0
VSX1-202ENST00000376709 AGRNO00468 2067 aa15.07■□□□□ 0
VSX1-202ENST00000376709 LINC01619G3V211 115 aa15.07■□□□□ 0
VSX1-202ENST00000376709 NXPH4O95158 308 aa15.07■□□□□ 0
VSX1-202ENST00000376709 NUDT3O95989 172 aa15.07■□□□□ 0
VSX1-202ENST00000376709 CDKN1BP46527 198 aa15.07■□□□□ 0
VSX1-202ENST00000376709 OR11H1Q8NG94 326 aa15.07■□□□□ 0
VSX1-202ENST00000376709 SPINK13Q1W4C9 94 aa15.06■□□□□ 0
VSX1-202ENST00000376709 OR1N2Q8NGR9 330 aa15.06■□□□□ 0
VSX1-202ENST00000376709 RPL39LQ96EH5 51 aaKnown RBP15.06■□□□□ 0
VSX1-202ENST00000376709 SORL1Q92673 2214 aa15.06■□□□□ 0
VSX1-202ENST00000376709 ATP5LO75964 103 aa15.05■□□□□ 0
VSX1-202ENST00000376709 DUSP14O95147 198 aaKnown RBP15.05■□□□□ 0
VSX1-202ENST00000376709 ADAMTSL5Q6ZMM2 481 aa15.05■□□□□ 0
VSX1-202ENST00000376709 C4orf3Q8WVX3 66 aa15.05■□□□□ 0
VSX1-202ENST00000376709 C20orf78Q9BR46 151 aa15.05■□□□□ 0
VSX1-202ENST00000376709 FOXI2Q6ZQN5 318 aa15.05■□□□□ -0
VSX1-202ENST00000376709 TMEM86BQ8N661 226 aa15.05■□□□□ -0
VSX1-202ENST00000376709 NF1P21359 2839 aa15.05■□□□□ -0
VSX1-202ENST00000376709 KRTAP1-1Q07627 177 aa15.04■□□□□ -0
VSX1-202ENST00000376709 ODF1Q14990 250 aa15.04■□□□□ -0
VSX1-202ENST00000376709 BVES-AS1Q5T3Y7 98 aa15.04■□□□□ -0
VSX1-202ENST00000376709 C2orf91Q6ZV80 131 aa15.04■□□□□ -0
VSX1-202ENST00000376709 DUX3Q96PT4 197 aa15.04■□□□□ -0
VSX1-202ENST00000376709 FOXC2Q99958 501 aa15.04■□□□□ -0
VSX1-202ENST00000376709 PEMTQ9UBM1 199 aa15.04■□□□□ -0
VSX1-202ENST00000376709 CUBNO60494 3623 aa15.03■□□□□ -0
VSX1-202ENST00000376709 FGF6P10767 208 aa15.03■□□□□ -0
VSX1-202ENST00000376709 ACANP16112 2415 aa15.03■□□□□ -0
VSX1-202ENST00000376709 DNAJC9-AS1A6NH13 148 aa15.02■□□□□ -0
VSX1-202ENST00000376709 PPP1R17O96001 155 aa15.02■□□□□ -0
VSX1-202ENST00000376709 ORMDL2Q53FV1 153 aa15.02■□□□□ -0
VSX1-202ENST00000376709 KLHL30-AS1Q8NEE0 82 aa15.02■□□□□ -0
VSX1-202ENST00000376709 OR9G4Q8NGQ1 327 aa15.02■□□□□ -0
VSX1-202ENST00000376709 C12orf54Q6X4T0 127 aa15.02□□□□□ -0.01
VSX1-202ENST00000376709 COX11Q9Y6N1 276 aa15.02□□□□□ -0.01
VSX1-202ENST00000376709 IGHV3-16A0A0C4DH30 117 aa15.01□□□□□ -0.01
VSX1-202ENST00000376709 Q6ZSV7 163 aa15.01□□□□□ -0.01
VSX1-202ENST00000376709 Q8N1Y9 231 aa15.01□□□□□ -0.01
VSX1-202ENST00000376709 JPT2Q9H910 190 aa15.01□□□□□ -0.01
VSX1-202ENST00000376709 KIF25-AS1Q9Y6Z4 181 aa15.01□□□□□ -0.01
VSX1-202ENST00000376709 IGHV1OR15-1A0A075B7D0 117 aa15□□□□□ -0.01
VSX1-202ENST00000376709 NMUP48645 174 aa15□□□□□ -0.01
VSX1-202ENST00000376709 HIST2H2BDQ6DRA6 164 aa15□□□□□ -0.01
VSX1-202ENST00000376709 ORAOV1Q8WV07 137 aa15□□□□□ -0.01
VSX1-202ENST00000376709 YAE1D1Q9NRH1 226 aa15□□□□□ -0.01
VSX1-202ENST00000376709 MDFICQ9P1T7 246 aa15□□□□□ -0.01
VSX1-202ENST00000376709 ANK3Q12955 4377 aaKnown RBP15□□□□□ -0.01
VSX1-202ENST00000376709 A0A087WWL8 130 aa15□□□□□ -0.01
VSX1-202ENST00000376709 K7EMI3 77 aa15□□□□□ -0.01
VSX1-202ENST00000376709 IGKCP01834 107 aa15□□□□□ -0.01
VSX1-202ENST00000376709 POM121L12Q8N7R1 296 aa15□□□□□ -0.01
VSX1-202ENST00000376709 ZMAT4Q9H898 229 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms