RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 RELNP78509 3460 aa12.52□□□□□ -0.41
TRIM39-201ENST00000376656 NDUFA11Q86Y39 141 aa12.52□□□□□ -0.41
TRIM39-201ENST00000376656 CENPVL3A0A0U1RRI6 287 aa12.51□□□□□ -0.41
TRIM39-201ENST00000376656 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
TRIM39-201ENST00000376656 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
TRIM39-201ENST00000376656 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
TRIM39-201ENST00000376656 A0A0J9YY99 117 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 OOSP1A8MZH6 123 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 Q6ZS46 218 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 U3KQE9 123 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 ASH1LQ9NR48 2969 aaKnown RBP12.5□□□□□ -0.41
TRIM39-201ENST00000376656 IGLV4-69A0A075B6H9 119 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 TSHBP01222 138 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 MINOS1Q5TGZ0 78 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 PPDPFLQ8WWR9 84 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 MINOS1-NBL1R4GNA1 71 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 ANXA2RQ3ZCQ2 193 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 TEN1Q86WV5 123 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
TRIM39-201ENST00000376656 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
TRIM39-201ENST00000376656 ASIPP42127 132 aa12.49□□□□□ -0.41
TRIM39-201ENST00000376656 GPHB5Q86YW7 130 aa12.49□□□□□ -0.41
TRIM39-201ENST00000376656 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
TRIM39-201ENST00000376656 GNRH2O43555 120 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 TSPEAR-AS2P59090 65 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 CFC1BP0CG36 223 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 CFC1P0CG37 223 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 KLK9Q2XQG4 91 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 KLK9Q9UKQ9 250 aa12.48□□□□□ -0.41
TRIM39-201ENST00000376656 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
TRIM39-201ENST00000376656 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
TRIM39-201ENST00000376656 HRNRQ86YZ3 2850 aaPredicted RBP12.47□□□□□ -0.41
TRIM39-201ENST00000376656 LENEPQ9Y5L5 61 aa12.47□□□□□ -0.41
TRIM39-201ENST00000376656 TTC28Q96AY4 2481 aa12.47□□□□□ -0.41
TRIM39-201ENST00000376656 C9orf139Q6ZV77 190 aa12.47□□□□□ -0.41
TRIM39-201ENST00000376656 LYRM7Q5U5X0 104 aa12.46□□□□□ -0.41
TRIM39-201ENST00000376656 C1orf122Q6ZSJ8 110 aa12.46□□□□□ -0.41
TRIM39-201ENST00000376656 TRBV7-1A0A0A6YYK4 115 aa12.46□□□□□ -0.42
TRIM39-201ENST00000376656 IGHV3-30P01768 117 aa12.46□□□□□ -0.42
TRIM39-201ENST00000376656 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.42
TRIM39-201ENST00000376656 RNASE4P34096 147 aaKnown RBP12.46□□□□□ -0.42
TRIM39-201ENST00000376656 AJUBAQ96IF1 538 aa12.46□□□□□ -0.42
TRIM39-201ENST00000376656 MUC4Q99102 2169 aa12.46□□□□□ -0.42
TRIM39-201ENST00000376656 A8MWV9 139 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 RPL39P62891 51 aaKnown RBP12.45□□□□□ -0.42
TRIM39-201ENST00000376656 ANKRD29Q8N6D5 301 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 LINC00477Q96M19 166 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 RNASE3P12724 160 aaKnown RBP12.45□□□□□ -0.42
TRIM39-201ENST00000376656 ARL3P36405 182 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 HERVK_113P61574 105 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 RNF183Q96D59 192 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 IGIPA6NJ69 53 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
TRIM39-201ENST00000376656 F6UB75 175 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 GATA3P23771 443 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 C10orf126Q8N4M7 172 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 TRBV20-1A0A075B6N2 111 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 SCGB1C2P0DMR2 95 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 TMEM170BQ5T4T1 132 aa12.44□□□□□ -0.42
TRIM39-201ENST00000376656 TLN1Q9Y490 2541 aaKnown RBP12.43□□□□□ -0.42
TRIM39-201ENST00000376656 ZNF292O60281 2723 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 PMVKQ15126 192 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 SLC25A29Q8N8R3 303 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 SPTBN2O15020 2390 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 JPT2Q9H910 190 aa12.43□□□□□ -0.42
TRIM39-201ENST00000376656 LINC00315P59091 139 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 ZNRF2Q8NHG8 242 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 IGHV1-69DA0A0B4J2H0 117 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 PRO1854Q9UHT4 67 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
TRIM39-201ENST00000376656 SAA4P35542 130 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 CDSNQ15517 529 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 PAPPA-AS1Q5QFB9 102 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 AMELXQ99217 191 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
TRIM39-201ENST00000376656 PPP1R17O96001 155 aa12.41□□□□□ -0.42
TRIM39-201ENST00000376656 OVOL1O14753 267 aa12.41□□□□□ -0.42
TRIM39-201ENST00000376656 TRBV12-3P01733 135 aa12.41□□□□□ -0.42
TRIM39-201ENST00000376656 MED14OSP0DP75 135 aa12.41□□□□□ -0.42
TRIM39-201ENST00000376656 RAX2Q96IS3 184 aa12.41□□□□□ -0.42
TRIM39-201ENST00000376656 IGKV3-7A0A075B6H7 116 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 SOCS3O14543 225 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 CRIP2P52943 208 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-201ENST00000376656 EIF4EBP3O60516 100 aaPredicted RBP12.4□□□□□ -0.42
TRIM39-201ENST00000376656 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
TRIM39-201ENST00000376656 C11orf71Q6IPW1 123 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 FAM19A4Q96LR4 140 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 VCX2Q9H322 139 aa12.4□□□□□ -0.42
TRIM39-201ENST00000376656 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
TRIM39-201ENST00000376656 SUMO4Q6EEV6 95 aa12.39□□□□□ -0.43
TRIM39-201ENST00000376656 TRPT1Q86TN4 253 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms